Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CD248Q9HCU0 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CD248Q9HCU0 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CD248Q9HCU0 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC15.34■□□□□ 0.05
CD248Q9HCU0 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CD248Q9HCU0 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.34■□□□□ 0.05
CD248Q9HCU0 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.34■□□□□ 0.05
CD248Q9HCU0 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.34■□□□□ 0.05
CD248Q9HCU0 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.34■□□□□ 0.05
CD248Q9HCU0 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.34■□□□□ 0.05
CD248Q9HCU0 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.34■□□□□ 0.05
CD248Q9HCU0 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.34■□□□□ 0.05
CD248Q9HCU0 RNA5SP423-201ENST00000517127 109 ntBASIC15.34■□□□□ 0.05
CD248Q9HCU0 AC022616.1-201ENST00000518688 554 ntBASIC15.34■□□□□ 0.05
CD248Q9HCU0 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.34■□□□□ 0.05
CD248Q9HCU0 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.34■□□□□ 0.05
CD248Q9HCU0 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC15.34■□□□□ 0.05
CD248Q9HCU0 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.34■□□□□ 0.05
CD248Q9HCU0 AC004466.1-201ENST00000599515 1080 ntBASIC15.34■□□□□ 0.05
CD248Q9HCU0 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.34■□□□□ 0.05
CD248Q9HCU0 AC244157.2-201ENST00000616239 1006 ntBASIC15.34■□□□□ 0.05
CD248Q9HCU0 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CD248Q9HCU0 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CD248Q9HCU0 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CD248Q9HCU0 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC15.34■□□□□ 0.05
CD248Q9HCU0 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC15.34■□□□□ 0.05
CD248Q9HCU0 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.34■□□□□ 0.05
CD248Q9HCU0 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CD248Q9HCU0 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CD248Q9HCU0 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CD248Q9HCU0 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CD248Q9HCU0 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
CD248Q9HCU0 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CD248Q9HCU0 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.34■□□□□ 0.05
CD248Q9HCU0 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CD248Q9HCU0 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
CD248Q9HCU0 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CD248Q9HCU0 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
CD248Q9HCU0 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.33■□□□□ 0.05
CD248Q9HCU0 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CD248Q9HCU0 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CD248Q9HCU0 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
CD248Q9HCU0 AC113367.3-201ENST00000508316 1912 ntBASIC15.33■□□□□ 0.05
CD248Q9HCU0 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CD248Q9HCU0 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
CD248Q9HCU0 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
CD248Q9HCU0 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CD248Q9HCU0 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CD248Q9HCU0 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CD248Q9HCU0 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CD248Q9HCU0 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CD248Q9HCU0 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CD248Q9HCU0 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CD248Q9HCU0 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CD248Q9HCU0 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.33■□□□□ 0.04
CD248Q9HCU0 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CD248Q9HCU0 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CD248Q9HCU0 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CD248Q9HCU0 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CD248Q9HCU0 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CD248Q9HCU0 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CD248Q9HCU0 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.33■□□□□ 0.04
CD248Q9HCU0 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CD248Q9HCU0 FNTAP2-201ENST00000430308 634 ntBASIC15.33■□□□□ 0.04
CD248Q9HCU0 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.33■□□□□ 0.04
CD248Q9HCU0 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.33■□□□□ 0.04
CD248Q9HCU0 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.33■□□□□ 0.04
CD248Q9HCU0 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.33■□□□□ 0.04
CD248Q9HCU0 IGHJ2P-201ENST00000454480 60 ntBASIC15.33■□□□□ 0.04
CD248Q9HCU0 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CD248Q9HCU0 AL391280.1-201ENST00000506969 1062 ntBASIC15.33■□□□□ 0.04
CD248Q9HCU0 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.33■□□□□ 0.04
CD248Q9HCU0 AC126915.1-201ENST00000522847 1038 ntBASIC15.33■□□□□ 0.04
CD248Q9HCU0 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CD248Q9HCU0 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CD248Q9HCU0 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.33■□□□□ 0.04
CD248Q9HCU0 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.33■□□□□ 0.04
CD248Q9HCU0 PPY2P-201ENST00000582808 702 ntBASIC15.33■□□□□ 0.04
CD248Q9HCU0 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CD248Q9HCU0 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CD248Q9HCU0 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CD248Q9HCU0 AL021578.1-201ENST00000613646 709 ntBASIC15.33■□□□□ 0.04
CD248Q9HCU0 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.33■□□□□ 0.04
CD248Q9HCU0 PPA1-206ENST00000625364 644 ntTSL 5 BASIC15.33■□□□□ 0.04
CD248Q9HCU0 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CD248Q9HCU0 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CD248Q9HCU0 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.33■□□□□ 0.04
CD248Q9HCU0 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CD248Q9HCU0 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CD248Q9HCU0 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CD248Q9HCU0 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CD248Q9HCU0 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CD248Q9HCU0 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CD248Q9HCU0 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CD248Q9HCU0 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CD248Q9HCU0 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CD248Q9HCU0 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.33■□□□□ 0.04
CD248Q9HCU0 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CD248Q9HCU0 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CD248Q9HCU0 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms