Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 MIR3615-201ENST00000581999 87 ntBASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF4Q9BUZ4 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 AP002761.4-201ENST00000565433 3361 ntBASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 AL354989.2-201ENST00000435838 1540 ntBASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 DNM1P41-201ENST00000623634 3350 ntBASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 HOMER2P2-201ENST00000451621 847 ntBASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 C2orf69P2-201ENST00000562032 1123 ntBASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 EEF1DP1-201ENST00000585891 896 ntBASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 AL022328.3-201ENST00000607943 679 ntBASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 AL645728.2-202ENST00000641679 227 ntBASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF4Q9BUZ4 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAF4Q9BUZ4 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAF4Q9BUZ4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAF4Q9BUZ4 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAF4Q9BUZ4 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAF4Q9BUZ4 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
TRAF4Q9BUZ4 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAF4Q9BUZ4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAF4Q9BUZ4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAF4Q9BUZ4 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAF4Q9BUZ4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAF4Q9BUZ4 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
TRAF4Q9BUZ4 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAF4Q9BUZ4 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAF4Q9BUZ4 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms