Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 SALL4P5-201ENST00000419001 1760 ntBASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 AC023090.2-201ENST00000625182 2110 ntBASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 RN7SKP175-201ENST00000408472 289 ntBASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 AC004945.1-201ENST00000416738 983 ntBASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 AC022494.1-201ENST00000466044 728 ntBASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 AP001258.2-201ENST00000529891 490 ntBASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 AL136301.1-201ENST00000615830 422 ntBASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 AC020907.1-201ENST00000616460 1350 ntBASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 AP000593.2-201ENST00000542775 1433 ntBASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 TCAF1P1-201ENST00000414990 2232 ntBASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
PCGF1Q9BSM1 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms