Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 AQP2-201ENST00000199280 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 AL359075.2-201ENST00000354921 4998 ntTSL 2 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 GIT2-203ENST00000355312 5466 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 HTR5BP-201ENST00000430851 1154 ntBASIC11.03□□□□□ -0.64
AP1S3Q96PC3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 AL079307.3-201ENST00000556114 283 ntBASIC11.03□□□□□ -0.64
AP1S3Q96PC3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 AC022145.2-201ENST00000598203 171 ntBASIC11.03□□□□□ -0.64
AP1S3Q96PC3 AL589739.1-201ENST00000607720 493 ntBASIC11.03□□□□□ -0.64
AP1S3Q96PC3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 BX640515.1-201ENST00000617215 977 ntBASIC11.03□□□□□ -0.64
AP1S3Q96PC3 MIR6080-201ENST00000617359 66 ntBASIC11.03□□□□□ -0.64
AP1S3Q96PC3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 LINC00628-201ENST00000628516 1289 ntBASIC11.03□□□□□ -0.64
AP1S3Q96PC3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 AC130686.1-201ENST00000622936 2466 ntBASIC11.03□□□□□ -0.64
AP1S3Q96PC3 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 ABCC5-201ENST00000265586 5712 ntTSL 5 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 PCDHB18P-202ENST00000526308 3197 ntBASIC11.03□□□□□ -0.64
AP1S3Q96PC3 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 TRAF3IP2-207ENST00000368761 5128 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 C2CD2-201ENST00000329623 5844 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC11.02□□□□□ -0.64
AP1S3Q96PC3 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC11.02□□□□□ -0.64
AP1S3Q96PC3 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
AP1S3Q96PC3 TP73-207ENST00000378290 1831 ntTSL 2 BASIC11.02□□□□□ -0.64
AP1S3Q96PC3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
AP1S3Q96PC3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
AP1S3Q96PC3 METTL16-201ENST00000263092 5711 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
AP1S3Q96PC3 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
AP1S3Q96PC3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC11.02□□□□□ -0.64
AP1S3Q96PC3 PRPF40A-202ENST00000410080 8048 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
AP1S3Q96PC3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
AP1S3Q96PC3 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
AP1S3Q96PC3 ACAN-206ENST00000559004 7628 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
AP1S3Q96PC3 PTPRS-201ENST00000262963 4766 ntTSL 5 BASIC11.02□□□□□ -0.64
AP1S3Q96PC3 PTPRS-210ENST00000592099 4766 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
AP1S3Q96PC3 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.64
AP1S3Q96PC3 RNF144B-201ENST00000259939 5036 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
AP1S3Q96PC3 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 AC004066.1-201ENST00000502488 802 ntBASIC11.02□□□□□ -0.65
AP1S3Q96PC3 SLC25A1P1-201ENST00000528351 927 ntBASIC11.02□□□□□ -0.65
AP1S3Q96PC3 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC11.02□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms