Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 LAP3P2-201ENST00000454686 1454 ntBASIC14.91□□□□□ -0.02
RPRD1AQ96P16 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 ACTG1P2-201ENST00000415776 1125 ntBASIC14.91□□□□□ -0.02
RPRD1AQ96P16 ACTG1P11-201ENST00000425411 1125 ntBASIC14.91□□□□□ -0.02
RPRD1AQ96P16 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 AL591471.1-201ENST00000621855 229 ntBASIC14.91□□□□□ -0.02
RPRD1AQ96P16 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPRD1AQ96P16 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 BCYRN1-201ENST00000418539 200 ntBASIC14.9□□□□□ -0.02
RPRD1AQ96P16 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.9□□□□□ -0.02
RPRD1AQ96P16 Z97180.1-201ENST00000445173 988 ntBASIC14.9□□□□□ -0.02
RPRD1AQ96P16 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 AC104506.1-201ENST00000609247 429 ntBASIC14.9□□□□□ -0.02
RPRD1AQ96P16 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPRD1AQ96P16 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms