Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.32■□□□□ 0.04
ATP2A3Q93084 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.32■□□□□ 0.04
ATP2A3Q93084 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP2A3Q93084 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATP2A3Q93084 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP2A3Q93084 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATP2A3Q93084 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
ATP2A3Q93084 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATP2A3Q93084 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
ATP2A3Q93084 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP2A3Q93084 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
ATP2A3Q93084 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATP2A3Q93084 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.32■□□□□ 0.04
ATP2A3Q93084 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP2A3Q93084 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.32■□□□□ 0.04
ATP2A3Q93084 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP2A3Q93084 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP2A3Q93084 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATP2A3Q93084 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
ATP2A3Q93084 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP2A3Q93084 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP2A3Q93084 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP2A3Q93084 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.32■□□□□ 0.04
ATP2A3Q93084 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.32■□□□□ 0.04
ATP2A3Q93084 RPL18P13-201ENST00000478088 569 ntBASIC15.32■□□□□ 0.04
ATP2A3Q93084 AL161670.2-201ENST00000557650 1227 ntBASIC15.32■□□□□ 0.04
ATP2A3Q93084 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC15.32■□□□□ 0.04
ATP2A3Q93084 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATP2A3Q93084 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP2A3Q93084 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.32■□□□□ 0.04
ATP2A3Q93084 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.32■□□□□ 0.04
ATP2A3Q93084 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.32■□□□□ 0.04
ATP2A3Q93084 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.32■□□□□ 0.04
ATP2A3Q93084 RETN-203ENST00000629642 400 ntTSL 5 BASIC15.32■□□□□ 0.04
ATP2A3Q93084 AC117489.1-201ENST00000625169 3217 ntBASIC15.32■□□□□ 0.04
ATP2A3Q93084 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATP2A3Q93084 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATP2A3Q93084 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP2A3Q93084 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.32■□□□□ 0.04
ATP2A3Q93084 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP2A3Q93084 AC003102.2-201ENST00000589195 1469 ntBASIC15.32■□□□□ 0.04
ATP2A3Q93084 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP2A3Q93084 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
ATP2A3Q93084 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.32■□□□□ 0.04
ATP2A3Q93084 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.32■□□□□ 0.04
ATP2A3Q93084 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP2A3Q93084 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
ATP2A3Q93084 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP2A3Q93084 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC15.32■□□□□ 0.04
ATP2A3Q93084 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP2A3Q93084 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATP2A3Q93084 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
ATP2A3Q93084 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.31■□□□□ 0.04
ATP2A3Q93084 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
ATP2A3Q93084 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.31■□□□□ 0.04
ATP2A3Q93084 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP2A3Q93084 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.31■□□□□ 0.04
ATP2A3Q93084 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.31■□□□□ 0.04
ATP2A3Q93084 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP2A3Q93084 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
ATP2A3Q93084 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP2A3Q93084 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.31■□□□□ 0.04
ATP2A3Q93084 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
ATP2A3Q93084 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP2A3Q93084 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP2A3Q93084 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP2A3Q93084 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP2A3Q93084 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.31■□□□□ 0.04
ATP2A3Q93084 ACTG1P2-201ENST00000415776 1125 ntBASIC15.31■□□□□ 0.04
ATP2A3Q93084 ACTG1P11-201ENST00000425411 1125 ntBASIC15.31■□□□□ 0.04
ATP2A3Q93084 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATP2A3Q93084 ALG3P1-201ENST00000508806 1114 ntBASIC15.31■□□□□ 0.04
ATP2A3Q93084 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.31■□□□□ 0.04
ATP2A3Q93084 AC009884.2-201ENST00000603110 324 ntBASIC15.31■□□□□ 0.04
ATP2A3Q93084 AL132994.2-201ENST00000603120 687 ntBASIC15.31■□□□□ 0.04
ATP2A3Q93084 AP000346.4-201ENST00000614827 381 ntBASIC15.31■□□□□ 0.04
ATP2A3Q93084 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC15.31■□□□□ 0.04
ATP2A3Q93084 AC131212.3-201ENST00000624087 4219 ntBASIC15.31■□□□□ 0.04
ATP2A3Q93084 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATP2A3Q93084 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
ATP2A3Q93084 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.31■□□□□ 0.04
ATP2A3Q93084 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATP2A3Q93084 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATP2A3Q93084 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP2A3Q93084 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP2A3Q93084 AL157791.1-201ENST00000553667 1699 ntBASIC15.31■□□□□ 0.04
ATP2A3Q93084 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP2A3Q93084 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP2A3Q93084 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.31■□□□□ 0.04
ATP2A3Q93084 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATP2A3Q93084 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ATP2A3Q93084 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP2A3Q93084 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP2A3Q93084 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATP2A3Q93084 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP2A3Q93084 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.31■□□□□ 0.04
ATP2A3Q93084 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.31■□□□□ 0.04
ATP2A3Q93084 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP2A3Q93084 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
ATP2A3Q93084 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms