Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 SPDYE22P-201ENST00000582158 798 ntBASIC12.62□□□□□ -0.39
CCDC107Q8WV48 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 AC011840.2-201ENST00000563063 1520 ntBASIC12.62□□□□□ -0.39
CCDC107Q8WV48 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 RN7SL832P-201ENST00000607781 1756 ntBASIC12.61□□□□□ -0.39
CCDC107Q8WV48 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 INTS4P2-202ENST00000614726 2019 ntBASIC12.61□□□□□ -0.39
CCDC107Q8WV48 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 C1QBPP1-201ENST00000400117 770 ntBASIC12.61□□□□□ -0.39
CCDC107Q8WV48 PMS2P2-201ENST00000425039 1128 ntBASIC12.61□□□□□ -0.39
CCDC107Q8WV48 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 AC120045.2-201ENST00000567334 178 ntBASIC12.61□□□□□ -0.39
CCDC107Q8WV48 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC107Q8WV48 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms