Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 RPL13AP3-202ENST00000494676 1473 ntBASIC15.31■□□□□ 0.04
NPAS4Q8IUM7 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NPAS4Q8IUM7 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS4Q8IUM7 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NPAS4Q8IUM7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.31■□□□□ 0.04
NPAS4Q8IUM7 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS4Q8IUM7 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS4Q8IUM7 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.31■□□□□ 0.04
NPAS4Q8IUM7 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NPAS4Q8IUM7 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS4Q8IUM7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 FUCA1P1-201ENST00000374476 1351 ntBASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 AC092573.1-201ENST00000433054 884 ntBASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 RN7SL494P-201ENST00000461517 304 ntBASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 AC008026.2-201ENST00000495438 348 ntBASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 OR2A1-AS1-210ENST00000496968 531 ntBASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 PCDHA3-202ENST00000532566 4594 ntBASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 VENTXP3-201ENST00000546480 773 ntBASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 AC055811.3-201ENST00000584952 686 ntBASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 HPX-213ENST00000615166 826 ntTSL 5 BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 AC091769.1-201ENST00000619576 568 ntBASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 AMT-256ENST00000638063 1783 ntTSL 5 BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 MTHFR-210ENST00000641407 2387 ntBASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS4Q8IUM7 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 AL672207.1-201ENST00000328462 1570 ntBASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 AC092384.3-202ENST00000564646 2873 ntBASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 AC103592.1-201ENST00000394513 664 ntBASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 OR52M2P-201ENST00000414298 959 ntBASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 AGPAT5P1-201ENST00000455855 1019 ntBASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 AC006529.1-201ENST00000459978 637 ntBASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPAS4Q8IUM7 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms