Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 KRT8P18-201ENST00000413425 1445 ntBASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 MYO15B-237ENST00000642007 4893 ntBASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
LYSMD4Q5XG99 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
LYSMD4Q5XG99 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LYSMD4Q5XG99 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
LYSMD4Q5XG99 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
LYSMD4Q5XG99 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LYSMD4Q5XG99 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LYSMD4Q5XG99 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LYSMD4Q5XG99 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.02□□□□□ -0.16
LYSMD4Q5XG99 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LYSMD4Q5XG99 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LYSMD4Q5XG99 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LYSMD4Q5XG99 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC14.02□□□□□ -0.16
LYSMD4Q5XG99 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC14.02□□□□□ -0.17
LYSMD4Q5XG99 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD4Q5XG99 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
LYSMD4Q5XG99 LINC00115-201ENST00000473798 1317 ntBASIC14.02□□□□□ -0.17
LYSMD4Q5XG99 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC14.02□□□□□ -0.17
LYSMD4Q5XG99 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD4Q5XG99 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD4Q5XG99 MIR566-201ENST00000385187 94 ntBASIC14.02□□□□□ -0.17
LYSMD4Q5XG99 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC14.02□□□□□ -0.17
LYSMD4Q5XG99 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD4Q5XG99 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
LYSMD4Q5XG99 RPS23-207ENST00000511844 530 ntTSL 2 BASIC14.02□□□□□ -0.17
LYSMD4Q5XG99 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD4Q5XG99 ABHD17AP9-201ENST00000561925 548 ntBASIC14.02□□□□□ -0.17
LYSMD4Q5XG99 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC14.02□□□□□ -0.17
LYSMD4Q5XG99 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD4Q5XG99 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
LYSMD4Q5XG99 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.02□□□□□ -0.17
LYSMD4Q5XG99 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD4Q5XG99 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD4Q5XG99 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD4Q5XG99 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
LYSMD4Q5XG99 MYADML-201ENST00000474610 2147 ntBASIC14.02□□□□□ -0.17
LYSMD4Q5XG99 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD4Q5XG99 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.02□□□□□ -0.17
LYSMD4Q5XG99 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD4Q5XG99 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 AC092573.1-201ENST00000433054 884 ntBASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 HLA-DPA2-205ENST00000433582 733 ntBASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 AC083801.1-201ENST00000491689 358 ntBASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 CISD2-202ENST00000503643 808 ntTSL 2 BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 SLC25A15P3-201ENST00000505530 290 ntBASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms