Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM27BQ5VT28 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FAM27BQ5VT28 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM27BQ5VT28 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FAM27BQ5VT28 FAM90A7P-201ENST00000382628 1395 ntBASIC12.66□□□□□ -0.38
FAM27BQ5VT28 FAM90A23P-201ENST00000400136 1395 ntBASIC12.66□□□□□ -0.38
FAM27BQ5VT28 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.66□□□□□ -0.38
FAM27BQ5VT28 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FAM27BQ5VT28 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM27BQ5VT28 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM27BQ5VT28 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
FAM27BQ5VT28 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.66□□□□□ -0.38
FAM27BQ5VT28 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM27BQ5VT28 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM27BQ5VT28 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
FAM27BQ5VT28 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.66□□□□□ -0.38
FAM27BQ5VT28 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
FAM27BQ5VT28 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 AC004899.1-201ENST00000424687 1714 ntBASIC12.65□□□□□ -0.38
FAM27BQ5VT28 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 KRT18P15-201ENST00000458108 1291 ntBASIC12.65□□□□□ -0.38
FAM27BQ5VT28 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 FADS2-212ENST00000522639 360 ntTSL 5 BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 PUDP-206ENST00000540122 825 ntTSL 2 BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 FADS2-215ENST00000574708 385 ntTSL 3 BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 AL136295.7-201ENST00000619226 1200 ntBASIC12.65□□□□□ -0.38
FAM27BQ5VT28 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.65□□□□□ -0.38
FAM27BQ5VT28 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 AC004923.1-202ENST00000642106 209 ntBASIC12.65□□□□□ -0.38
FAM27BQ5VT28 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
FAM27BQ5VT28 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
FAM27BQ5VT28 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
FAM27BQ5VT28 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.65□□□□□ -0.39
FAM27BQ5VT28 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
FAM27BQ5VT28 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
FAM27BQ5VT28 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FAM27BQ5VT28 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.64□□□□□ -0.39
FAM27BQ5VT28 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.64□□□□□ -0.39
FAM27BQ5VT28 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
FAM27BQ5VT28 CCT8L1P-201ENST00000465400 1674 ntBASIC12.64□□□□□ -0.39
FAM27BQ5VT28 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.64□□□□□ -0.39
FAM27BQ5VT28 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FAM27BQ5VT28 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FAM27BQ5VT28 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
FAM27BQ5VT28 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.64□□□□□ -0.39
FAM27BQ5VT28 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
FAM27BQ5VT28 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FAM27BQ5VT28 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
FAM27BQ5VT28 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.64□□□□□ -0.39
FAM27BQ5VT28 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.64□□□□□ -0.39
FAM27BQ5VT28 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
FAM27BQ5VT28 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
FAM27BQ5VT28 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
FAM27BQ5VT28 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms