Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CDK3Q00526 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.18□□□□□ -0.14
CDK3Q00526 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDK3Q00526 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CDK3Q00526 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDK3Q00526 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDK3Q00526 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDK3Q00526 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
CDK3Q00526 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.18□□□□□ -0.14
CDK3Q00526 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDK3Q00526 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDK3Q00526 BRD7P5-201ENST00000299197 1822 ntBASIC14.18□□□□□ -0.14
CDK3Q00526 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.18□□□□□ -0.14
CDK3Q00526 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDK3Q00526 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDK3Q00526 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDK3Q00526 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDK3Q00526 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDK3Q00526 BX640514.1-201ENST00000583223 1918 ntBASIC14.17□□□□□ -0.14
CDK3Q00526 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDK3Q00526 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
CDK3Q00526 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDK3Q00526 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDK3Q00526 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.17□□□□□ -0.14
CDK3Q00526 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDK3Q00526 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CDK3Q00526 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDK3Q00526 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDK3Q00526 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDK3Q00526 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.17□□□□□ -0.14
CDK3Q00526 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDK3Q00526 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDK3Q00526 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CDK3Q00526 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CDK3Q00526 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.17□□□□□ -0.14
CDK3Q00526 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDK3Q00526 RPL8P2-201ENST00000430538 502 ntBASIC14.17□□□□□ -0.14
CDK3Q00526 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.17□□□□□ -0.14
CDK3Q00526 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.17□□□□□ -0.14
CDK3Q00526 EEF1DP6-201ENST00000449232 372 ntBASIC14.17□□□□□ -0.14
CDK3Q00526 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDK3Q00526 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDK3Q00526 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.17□□□□□ -0.14
CDK3Q00526 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.17□□□□□ -0.14
CDK3Q00526 AC079328.1-201ENST00000560358 952 ntBASIC14.17□□□□□ -0.14
CDK3Q00526 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.17□□□□□ -0.14
CDK3Q00526 MIR3677-201ENST00000578964 60 ntBASIC14.17□□□□□ -0.14
CDK3Q00526 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.17□□□□□ -0.14
CDK3Q00526 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.17□□□□□ -0.14
CDK3Q00526 HSPA8P5-201ENST00000456928 2069 ntBASIC14.17□□□□□ -0.14
CDK3Q00526 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDK3Q00526 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.17□□□□□ -0.14
CDK3Q00526 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDK3Q00526 CAP2P1-201ENST00000557743 1390 ntBASIC14.17□□□□□ -0.14
CDK3Q00526 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.17□□□□□ -0.14
CDK3Q00526 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDK3Q00526 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDK3Q00526 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDK3Q00526 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDK3Q00526 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDK3Q00526 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CDK3Q00526 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.17□□□□□ -0.14
CDK3Q00526 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDK3Q00526 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.17□□□□□ -0.14
CDK3Q00526 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CDK3Q00526 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDK3Q00526 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDK3Q00526 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.16□□□□□ -0.14
CDK3Q00526 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK3Q00526 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CDK3Q00526 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK3Q00526 KRT8P31-201ENST00000504812 1408 ntBASIC14.16□□□□□ -0.14
CDK3Q00526 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK3Q00526 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.16□□□□□ -0.14
CDK3Q00526 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDK3Q00526 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK3Q00526 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.16□□□□□ -0.14
CDK3Q00526 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.16□□□□□ -0.14
CDK3Q00526 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CDK3Q00526 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK3Q00526 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
CDK3Q00526 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDK3Q00526 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CDK3Q00526 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK3Q00526 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK3Q00526 KRT17P5-201ENST00000332088 839 ntBASIC14.16□□□□□ -0.14
CDK3Q00526 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.16□□□□□ -0.14
CDK3Q00526 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDK3Q00526 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDK3Q00526 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDK3Q00526 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.16□□□□□ -0.14
CDK3Q00526 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.16□□□□□ -0.14
CDK3Q00526 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.16□□□□□ -0.14
CDK3Q00526 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.16□□□□□ -0.14
CDK3Q00526 MAGEA5-201ENST00000446757 942 ntBASIC14.16□□□□□ -0.14
CDK3Q00526 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.16□□□□□ -0.14
CDK3Q00526 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.16□□□□□ -0.14
CDK3Q00526 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.16□□□□□ -0.14
CDK3Q00526 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.16□□□□□ -0.14
CDK3Q00526 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms