Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IRX3P78415 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
IRX3P78415 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IRX3P78415 TMBIM7P-203ENST00000641617 1718 ntBASIC16.93■□□□□ 0.3
IRX3P78415 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
IRX3P78415 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.93■□□□□ 0.3
IRX3P78415 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
IRX3P78415 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.92■□□□□ 0.3
IRX3P78415 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
IRX3P78415 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
IRX3P78415 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
IRX3P78415 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
IRX3P78415 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.92■□□□□ 0.3
IRX3P78415 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.92■□□□□ 0.3
IRX3P78415 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IRX3P78415 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IRX3P78415 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
IRX3P78415 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.92■□□□□ 0.3
IRX3P78415 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.92■□□□□ 0.3
IRX3P78415 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
IRX3P78415 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
IRX3P78415 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.92■□□□□ 0.3
IRX3P78415 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
IRX3P78415 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IRX3P78415 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IRX3P78415 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.92■□□□□ 0.3
IRX3P78415 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.92■□□□□ 0.3
IRX3P78415 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.92■□□□□ 0.3
IRX3P78415 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.92■□□□□ 0.3
IRX3P78415 AL627422.1-201ENST00000434104 580 ntBASIC16.92■□□□□ 0.3
IRX3P78415 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.92■□□□□ 0.3
IRX3P78415 AC130709.1-201ENST00000484779 1212 ntBASIC16.92■□□□□ 0.3
IRX3P78415 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC16.92■□□□□ 0.3
IRX3P78415 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
IRX3P78415 MIR4522-201ENST00000584932 87 ntBASIC16.92■□□□□ 0.3
IRX3P78415 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.92■□□□□ 0.3
IRX3P78415 SIGLEC18P-201ENST00000602271 909 ntBASIC16.92■□□□□ 0.3
IRX3P78415 AC087392.5-201ENST00000612517 489 ntBASIC16.92■□□□□ 0.3
IRX3P78415 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
IRX3P78415 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
IRX3P78415 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
IRX3P78415 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
IRX3P78415 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IRX3P78415 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IRX3P78415 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.92■□□□□ 0.3
IRX3P78415 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IRX3P78415 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
IRX3P78415 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
IRX3P78415 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
IRX3P78415 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
IRX3P78415 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC16.92■□□□□ 0.3
IRX3P78415 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
IRX3P78415 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IRX3P78415 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IRX3P78415 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.91■□□□□ 0.3
IRX3P78415 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.91■□□□□ 0.3
IRX3P78415 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IRX3P78415 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.91■□□□□ 0.3
IRX3P78415 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IRX3P78415 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC16.91■□□□□ 0.3
IRX3P78415 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.91■□□□□ 0.3
IRX3P78415 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
IRX3P78415 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IRX3P78415 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
IRX3P78415 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IRX3P78415 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
IRX3P78415 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.91■□□□□ 0.3
IRX3P78415 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IRX3P78415 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.91■□□□□ 0.3
IRX3P78415 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
IRX3P78415 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
IRX3P78415 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IRX3P78415 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IRX3P78415 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
IRX3P78415 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC16.91■□□□□ 0.3
IRX3P78415 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC16.91■□□□□ 0.3
IRX3P78415 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC16.91■□□□□ 0.3
IRX3P78415 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.91■□□□□ 0.3
IRX3P78415 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC16.91■□□□□ 0.3
IRX3P78415 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC16.91■□□□□ 0.3
IRX3P78415 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
IRX3P78415 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
IRX3P78415 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC16.91■□□□□ 0.3
IRX3P78415 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC16.91■□□□□ 0.3
IRX3P78415 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC16.91■□□□□ 0.3
IRX3P78415 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC16.91■□□□□ 0.3
IRX3P78415 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IRX3P78415 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
IRX3P78415 AC009084.3-201ENST00000623356 437 ntBASIC16.91■□□□□ 0.3
IRX3P78415 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
IRX3P78415 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.91■□□□□ 0.3
IRX3P78415 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
IRX3P78415 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IRX3P78415 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
IRX3P78415 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IRX3P78415 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IRX3P78415 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IRX3P78415 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IRX3P78415 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IRX3P78415 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms