Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA4P78363 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA4P78363 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA4P78363 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA4P78363 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.45□□□□□ -0.42
ABCA4P78363 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA4P78363 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.45□□□□□ -0.42
ABCA4P78363 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
ABCA4P78363 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA4P78363 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.45□□□□□ -0.42
ABCA4P78363 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC12.45□□□□□ -0.42
ABCA4P78363 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA4P78363 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.45□□□□□ -0.42
ABCA4P78363 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA4P78363 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA4P78363 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.45□□□□□ -0.42
ABCA4P78363 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA4P78363 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA4P78363 Z69890.1-201ENST00000382990 339 ntBASIC12.45□□□□□ -0.42
ABCA4P78363 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA4P78363 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA4P78363 HKR1-225ENST00000592168 566 ntTSL 4 BASIC12.45□□□□□ -0.42
ABCA4P78363 AP001527.2-201ENST00000614441 631 ntBASIC12.45□□□□□ -0.42
ABCA4P78363 PLS3-210ENST00000626746 216 ntTSL 4 BASIC12.45□□□□□ -0.42
ABCA4P78363 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
ABCA4P78363 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA4P78363 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA4P78363 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.45□□□□□ -0.42
ABCA4P78363 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA4P78363 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA4P78363 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA4P78363 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.44□□□□□ -0.42
ABCA4P78363 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
ABCA4P78363 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.44□□□□□ -0.42
ABCA4P78363 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.44□□□□□ -0.42
ABCA4P78363 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.44□□□□□ -0.42
ABCA4P78363 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
ABCA4P78363 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
ABCA4P78363 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
ABCA4P78363 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.44□□□□□ -0.42
ABCA4P78363 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC12.44□□□□□ -0.42
ABCA4P78363 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC12.44□□□□□ -0.42
ABCA4P78363 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC12.44□□□□□ -0.42
ABCA4P78363 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC12.44□□□□□ -0.42
ABCA4P78363 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.44□□□□□ -0.42
ABCA4P78363 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
ABCA4P78363 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC12.44□□□□□ -0.42
ABCA4P78363 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.44□□□□□ -0.42
ABCA4P78363 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
ABCA4P78363 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.44□□□□□ -0.42
ABCA4P78363 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.44□□□□□ -0.42
ABCA4P78363 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.44□□□□□ -0.42
ABCA4P78363 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.44□□□□□ -0.42
ABCA4P78363 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
ABCA4P78363 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
ABCA4P78363 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 CICP12-201ENST00000455801 843 ntBASIC12.44□□□□□ -0.42
ABCA4P78363 AC024293.1-201ENST00000467930 498 ntBASIC12.44□□□□□ -0.42
ABCA4P78363 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC12.44□□□□□ -0.42
ABCA4P78363 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC12.44□□□□□ -0.42
ABCA4P78363 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.44□□□□□ -0.42
ABCA4P78363 AC124068.2-201ENST00000569473 1109 ntBASIC12.44□□□□□ -0.42
ABCA4P78363 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ABCA4P78363 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms