Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.09■□□□□ 0.01
CDH6P55285 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.09■□□□□ 0.01
CDH6P55285 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.09■□□□□ 0.01
CDH6P55285 DUX4L45-201ENST00000566406 1057 ntBASIC15.09■□□□□ 0.01
CDH6P55285 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.09■□□□□ 0.01
CDH6P55285 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CDH6P55285 MIR4741-201ENST00000579822 90 ntBASIC15.09■□□□□ 0.01
CDH6P55285 MIR4783-201ENST00000580343 82 ntBASIC15.09■□□□□ 0.01
CDH6P55285 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.09■□□□□ 0.01
CDH6P55285 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH6P55285 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDH6P55285 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDH6P55285 AL008718.2-201ENST00000609206 1313 ntBASIC15.09■□□□□ 0.01
CDH6P55285 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CDH6P55285 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.09■□□□□ 0.01
CDH6P55285 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDH6P55285 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CDH6P55285 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.09■□□□□ 0.01
CDH6P55285 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH6P55285 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH6P55285 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH6P55285 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CDH6P55285 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CDH6P55285 RET-205ENST00000615310 4337 ntTSL 5 BASIC15.08■□□□□ 0.01
CDH6P55285 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.08■□□□□ 0.01
CDH6P55285 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CDH6P55285 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CDH6P55285 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CDH6P55285 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
CDH6P55285 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
CDH6P55285 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.08■□□□□ 0
CDH6P55285 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH6P55285 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH6P55285 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH6P55285 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH6P55285 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
CDH6P55285 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CDH6P55285 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
CDH6P55285 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH6P55285 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDH6P55285 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CDH6P55285 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.08■□□□□ 0
CDH6P55285 MIR658-201ENST00000385210 100 ntBASIC15.08■□□□□ 0
CDH6P55285 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.08■□□□□ 0
CDH6P55285 AC119751.2-201ENST00000504529 210 ntBASIC15.08■□□□□ 0
CDH6P55285 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.08■□□□□ 0
CDH6P55285 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.08■□□□□ 0
CDH6P55285 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.08■□□□□ 0
CDH6P55285 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH6P55285 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.08■□□□□ 0
CDH6P55285 AC244157.2-201ENST00000616239 1006 ntBASIC15.08■□□□□ 0
CDH6P55285 AC126335.2-201ENST00000623362 4637 ntBASIC15.08■□□□□ 0
CDH6P55285 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH6P55285 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDH6P55285 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CDH6P55285 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CDH6P55285 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH6P55285 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDH6P55285 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CDH6P55285 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CDH6P55285 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.08■□□□□ 0
CDH6P55285 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH6P55285 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CDH6P55285 AL157996.1-201ENST00000624684 2299 ntBASIC15.08■□□□□ 0
CDH6P55285 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH6P55285 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDH6P55285 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDH6P55285 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH6P55285 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CDH6P55285 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH6P55285 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CDH6P55285 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH6P55285 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH6P55285 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.07■□□□□ 0
CDH6P55285 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CDH6P55285 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
CDH6P55285 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CDH6P55285 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.07■□□□□ 0
CDH6P55285 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH6P55285 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CDH6P55285 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH6P55285 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH6P55285 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
CDH6P55285 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.07■□□□□ 0
CDH6P55285 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.07■□□□□ 0
CDH6P55285 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
CDH6P55285 ATP5G2P4-201ENST00000442175 420 ntBASIC15.07■□□□□ 0
CDH6P55285 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.07■□□□□ 0
CDH6P55285 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH6P55285 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.07■□□□□ 0
CDH6P55285 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.07■□□□□ 0
CDH6P55285 RBM8B-201ENST00000555532 525 ntBASIC15.07■□□□□ 0
CDH6P55285 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CDH6P55285 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.07■□□□□ 0
CDH6P55285 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.07■□□□□ 0
CDH6P55285 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CDH6P55285 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CDH6P55285 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
CDH6P55285 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.07■□□□□ 0
CDH6P55285 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms