Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
GTF2A1P52655 ACCS-201ENST00000263776 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GTF2A1P52655 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GTF2A1P52655 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GTF2A1P52655 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GTF2A1P52655 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GTF2A1P52655 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GTF2A1P52655 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
GTF2A1P52655 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GTF2A1P52655 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GTF2A1P52655 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GTF2A1P52655 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.22□□□□□ -0.13
GTF2A1P52655 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
GTF2A1P52655 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
GTF2A1P52655 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.22□□□□□ -0.13
GTF2A1P52655 FAM210CP-201ENST00000445714 574 ntBASIC14.22□□□□□ -0.13
GTF2A1P52655 SAPCD2P3-201ENST00000455031 850 ntBASIC14.22□□□□□ -0.13
GTF2A1P52655 AC108073.2-201ENST00000464002 357 ntBASIC14.22□□□□□ -0.13
GTF2A1P52655 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.22□□□□□ -0.13
GTF2A1P52655 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.22□□□□□ -0.13
GTF2A1P52655 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.22□□□□□ -0.13
GTF2A1P52655 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.22□□□□□ -0.13
GTF2A1P52655 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.22□□□□□ -0.13
GTF2A1P52655 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.22□□□□□ -0.13
GTF2A1P52655 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.22□□□□□ -0.13
GTF2A1P52655 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.22□□□□□ -0.13
GTF2A1P52655 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.22□□□□□ -0.13
GTF2A1P52655 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GTF2A1P52655 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
GTF2A1P52655 MIR1199-201ENST00000621445 119 ntBASIC14.22□□□□□ -0.13
GTF2A1P52655 RIOK3-201ENST00000339486 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
GTF2A1P52655 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
GTF2A1P52655 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GTF2A1P52655 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
GTF2A1P52655 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.22□□□□□ -0.13
GTF2A1P52655 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GTF2A1P52655 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
GTF2A1P52655 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GTF2A1P52655 DCLRE1C-210ENST00000378289 3532 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GTF2A1P52655 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC14.22□□□□□ -0.13
GTF2A1P52655 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.22□□□□□ -0.13
GTF2A1P52655 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
GTF2A1P52655 AC006037.2-201ENST00000622975 2232 ntBASIC14.22□□□□□ -0.13
GTF2A1P52655 AC106865.1-201ENST00000602666 3034 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GTF2A1P52655 AC093525.7-201ENST00000569852 3626 ntBASIC14.22□□□□□ -0.13
GTF2A1P52655 PTPN1-201ENST00000371621 4008 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GTF2A1P52655 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
GTF2A1P52655 HPGD-214ENST00000542498 2786 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GTF2A1P52655 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.22□□□□□ -0.13
GTF2A1P52655 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GTF2A1P52655 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.21□□□□□ -0.13
GTF2A1P52655 GUCY2EP-203ENST00000531117 1918 ntBASIC14.21□□□□□ -0.13
GTF2A1P52655 AQP7-205ENST00000379507 2879 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
GTF2A1P52655 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
GTF2A1P52655 TK2-206ENST00000527800 2687 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GTF2A1P52655 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GTF2A1P52655 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC14.21□□□□□ -0.13
GTF2A1P52655 AL157996.1-201ENST00000624684 2299 ntBASIC14.21□□□□□ -0.13
GTF2A1P52655 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GTF2A1P52655 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.21□□□□□ -0.13
GTF2A1P52655 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GTF2A1P52655 PRPF6-201ENST00000266079 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GTF2A1P52655 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
GTF2A1P52655 SMAP1-203ENST00000370455 3333 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GTF2A1P52655 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
GTF2A1P52655 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
GTF2A1P52655 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GTF2A1P52655 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GTF2A1P52655 AP002414.3-201ENST00000589352 1468 ntBASIC14.21□□□□□ -0.13
GTF2A1P52655 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GTF2A1P52655 AC091078.1-202ENST00000543286 2012 ntTSL 2 BASIC14.21□□□□□ -0.13
GTF2A1P52655 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
GTF2A1P52655 LIMK2-202ENST00000333611 3462 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GTF2A1P52655 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GTF2A1P52655 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
GTF2A1P52655 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GTF2A1P52655 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
GTF2A1P52655 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
GTF2A1P52655 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.21□□□□□ -0.13
GTF2A1P52655 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.21□□□□□ -0.13
GTF2A1P52655 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.21□□□□□ -0.13
GTF2A1P52655 CXCL1P1-201ENST00000502804 216 ntBASIC14.21□□□□□ -0.13
GTF2A1P52655 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
GTF2A1P52655 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GTF2A1P52655 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.21□□□□□ -0.13
GTF2A1P52655 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC14.21□□□□□ -0.13
GTF2A1P52655 AL365330.1-201ENST00000607459 531 ntBASIC14.21□□□□□ -0.13
GTF2A1P52655 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.21□□□□□ -0.13
GTF2A1P52655 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.21□□□□□ -0.13
GTF2A1P52655 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.21□□□□□ -0.13
GTF2A1P52655 HK2P1-201ENST00000447818 2737 ntBASIC14.21□□□□□ -0.13
GTF2A1P52655 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.21□□□□□ -0.13
GTF2A1P52655 RTN3-203ENST00000341307 2524 ntTSL 2 BASIC14.21□□□□□ -0.13
GTF2A1P52655 SLC38A1-202ENST00000439706 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GTF2A1P52655 GOLGA6L2-202ENST00000345070 1972 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
GTF2A1P52655 NOSTRIN-203ENST00000397209 1437 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GTF2A1P52655 SEPT2-204ENST00000391973 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GTF2A1P52655 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
GTF2A1P52655 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
GTF2A1P52655 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms