Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBP50607 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBP50607 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.28■□□□□ 0.04
TUBP50607 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TUBP50607 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBP50607 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TUBP50607 TMBIM7P-202ENST00000641474 1516 ntBASIC15.28■□□□□ 0.04
TUBP50607 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TUBP50607 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBP50607 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TUBP50607 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.28■□□□□ 0.04
TUBP50607 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBP50607 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBP50607 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBP50607 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBP50607 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBP50607 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TUBP50607 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TUBP50607 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBP50607 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBP50607 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.28■□□□□ 0.04
TUBP50607 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBP50607 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.28■□□□□ 0.04
TUBP50607 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.28■□□□□ 0.04
TUBP50607 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBP50607 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBP50607 AL161670.2-201ENST00000557650 1227 ntBASIC15.28■□□□□ 0.04
TUBP50607 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.28■□□□□ 0.04
TUBP50607 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.28■□□□□ 0.04
TUBP50607 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.28■□□□□ 0.04
TUBP50607 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.28■□□□□ 0.04
TUBP50607 AP001505.2-201ENST00000616815 443 ntBASIC15.28■□□□□ 0.04
TUBP50607 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TUBP50607 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBP50607 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBP50607 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TUBP50607 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBP50607 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBP50607 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TUBP50607 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBP50607 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBP50607 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBP50607 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBP50607 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TUBP50607 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
TUBP50607 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBP50607 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBP50607 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TUBP50607 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
TUBP50607 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBP50607 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TUBP50607 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TUBP50607 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.28■□□□□ 0.04
TUBP50607 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBP50607 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBP50607 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.27■□□□□ 0.04
TUBP50607 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TUBP50607 AC113367.3-201ENST00000508316 1912 ntBASIC15.27■□□□□ 0.04
TUBP50607 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.27■□□□□ 0.04
TUBP50607 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.27■□□□□ 0.04
TUBP50607 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
TUBP50607 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBP50607 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TUBP50607 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBP50607 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TUBP50607 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBP50607 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBP50607 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.27■□□□□ 0.04
TUBP50607 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBP50607 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
TUBP50607 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC15.27■□□□□ 0.04
TUBP50607 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.27■□□□□ 0.04
TUBP50607 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.27■□□□□ 0.04
TUBP50607 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBP50607 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBP50607 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBP50607 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TUBP50607 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBP50607 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TUBP50607 RN7SL11P-201ENST00000471305 293 ntBASIC15.27■□□□□ 0.04
TUBP50607 TSACC-208ENST00000481479 741 ntTSL 2 BASIC15.27■□□□□ 0.04
TUBP50607 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TUBP50607 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.27■□□□□ 0.04
TUBP50607 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TUBP50607 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.27■□□□□ 0.04
TUBP50607 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.27■□□□□ 0.04
TUBP50607 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.27■□□□□ 0.04
TUBP50607 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.27■□□□□ 0.04
TUBP50607 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.27■□□□□ 0.04
TUBP50607 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBP50607 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC15.27■□□□□ 0.04
TUBP50607 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC15.27■□□□□ 0.04
TUBP50607 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.27■□□□□ 0.04
TUBP50607 AC106872.11-201ENST00000605838 421 ntBASIC15.27■□□□□ 0.04
TUBP50607 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
TUBP50607 PPA1-206ENST00000625364 644 ntTSL 5 BASIC15.27■□□□□ 0.04
TUBP50607 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
TUBP50607 AL157791.1-201ENST00000553667 1699 ntBASIC15.27■□□□□ 0.03
TUBP50607 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TUBP50607 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms