Protein–RNA interactions for Protein: P48058

GRIA4, Glutamate receptor 4, humanhuman

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA4P48058 AL589935.2-201ENST00000616471 1231 ntBASIC14.86□□□□□ -0.03
GRIA4P48058 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.86□□□□□ -0.03
GRIA4P48058 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.86□□□□□ -0.03
GRIA4P48058 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.86□□□□□ -0.03
GRIA4P48058 AC004923.1-202ENST00000642106 209 ntBASIC14.86□□□□□ -0.03
GRIA4P48058 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GRIA4P48058 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GRIA4P48058 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GRIA4P48058 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.86□□□□□ -0.03
GRIA4P48058 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GRIA4P48058 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GRIA4P48058 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GRIA4P48058 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.86□□□□□ -0.03
GRIA4P48058 AC139712.1-201ENST00000378256 1875 ntBASIC14.86□□□□□ -0.03
GRIA4P48058 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GRIA4P48058 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
GRIA4P48058 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.86□□□□□ -0.03
GRIA4P48058 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GRIA4P48058 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.86□□□□□ -0.03
GRIA4P48058 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GRIA4P48058 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.86□□□□□ -0.03
GRIA4P48058 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
GRIA4P48058 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GRIA4P48058 AC007326.2-201ENST00000624224 7579 ntBASIC14.86□□□□□ -0.03
GRIA4P48058 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
GRIA4P48058 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GRIA4P48058 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
GRIA4P48058 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
GRIA4P48058 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
GRIA4P48058 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.85□□□□□ -0.03
GRIA4P48058 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.85□□□□□ -0.03
GRIA4P48058 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.85□□□□□ -0.03
GRIA4P48058 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.85□□□□□ -0.03
GRIA4P48058 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 GGCT-203ENST00000409144 836 ntTSL 2 BASIC14.85□□□□□ -0.03
GRIA4P48058 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.85□□□□□ -0.03
GRIA4P48058 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.85□□□□□ -0.03
GRIA4P48058 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.85□□□□□ -0.03
GRIA4P48058 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.85□□□□□ -0.03
GRIA4P48058 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.85□□□□□ -0.03
GRIA4P48058 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.85□□□□□ -0.03
GRIA4P48058 RNMTL1P1-201ENST00000454103 560 ntBASIC14.85□□□□□ -0.03
GRIA4P48058 TMEM198B-204ENST00000484016 896 ntBASIC14.85□□□□□ -0.03
GRIA4P48058 AC024681.1-201ENST00000521917 487 ntBASIC14.85□□□□□ -0.03
GRIA4P48058 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.85□□□□□ -0.03
GRIA4P48058 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.85□□□□□ -0.03
GRIA4P48058 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.85□□□□□ -0.03
GRIA4P48058 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.85□□□□□ -0.03
GRIA4P48058 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.85□□□□□ -0.03
GRIA4P48058 AL136295.7-201ENST00000619226 1200 ntBASIC14.85□□□□□ -0.03
GRIA4P48058 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
GRIA4P48058 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
GRIA4P48058 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
GRIA4P48058 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC14.85□□□□□ -0.03
GRIA4P48058 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
GRIA4P48058 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.85□□□□□ -0.03
GRIA4P48058 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
GRIA4P48058 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GRIA4P48058 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.85□□□□□ -0.03
GRIA4P48058 AC015688.4-201ENST00000580780 1647 ntBASIC14.84□□□□□ -0.03
GRIA4P48058 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
GRIA4P48058 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
GRIA4P48058 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
GRIA4P48058 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
GRIA4P48058 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
GRIA4P48058 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms