Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A2P43354 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.28□□□□□ -0.28
NR4A2P43354 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A2P43354 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A2P43354 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.28□□□□□ -0.28
NR4A2P43354 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A2P43354 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
NR4A2P43354 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.28□□□□□ -0.28
NR4A2P43354 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
NR4A2P43354 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
NR4A2P43354 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A2P43354 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.28□□□□□ -0.28
NR4A2P43354 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A2P43354 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A2P43354 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A2P43354 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A2P43354 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.28□□□□□ -0.28
NR4A2P43354 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.28□□□□□ -0.28
NR4A2P43354 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A2P43354 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.28□□□□□ -0.28
NR4A2P43354 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.28□□□□□ -0.28
NR4A2P43354 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.28□□□□□ -0.28
NR4A2P43354 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.28□□□□□ -0.28
NR4A2P43354 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.28□□□□□ -0.28
NR4A2P43354 AC010319.3-201ENST00000597028 470 ntBASIC13.28□□□□□ -0.28
NR4A2P43354 AC133539.2-201ENST00000604757 467 ntBASIC13.28□□□□□ -0.28
NR4A2P43354 MIR6799-201ENST00000620297 69 ntBASIC13.28□□□□□ -0.28
NR4A2P43354 AL158212.4-201ENST00000624062 1286 ntBASIC13.28□□□□□ -0.28
NR4A2P43354 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
NR4A2P43354 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A2P43354 BX324167.2-201ENST00000623717 3316 ntBASIC13.28□□□□□ -0.28
NR4A2P43354 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
NR4A2P43354 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A2P43354 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A2P43354 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A2P43354 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A2P43354 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A2P43354 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A2P43354 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC13.28□□□□□ -0.28
NR4A2P43354 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A2P43354 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A2P43354 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A2P43354 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A2P43354 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A2P43354 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A2P43354 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A2P43354 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.28□□□□□ -0.28
NR4A2P43354 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
NR4A2P43354 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A2P43354 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.28□□□□□ -0.28
NR4A2P43354 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
NR4A2P43354 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.27□□□□□ -0.28
NR4A2P43354 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.27□□□□□ -0.28
NR4A2P43354 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
NR4A2P43354 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.27□□□□□ -0.28
NR4A2P43354 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NR4A2P43354 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC13.27□□□□□ -0.28
NR4A2P43354 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
NR4A2P43354 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC13.27□□□□□ -0.28
NR4A2P43354 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
NR4A2P43354 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NR4A2P43354 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
NR4A2P43354 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.27□□□□□ -0.29
NR4A2P43354 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NR4A2P43354 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NR4A2P43354 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.27□□□□□ -0.29
NR4A2P43354 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
NR4A2P43354 BOLA2P3-201ENST00000404566 256 ntBASIC13.27□□□□□ -0.29
NR4A2P43354 AL442647.2-201ENST00000429864 857 ntBASIC13.27□□□□□ -0.29
NR4A2P43354 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.27□□□□□ -0.29
NR4A2P43354 KRT43P-201ENST00000434019 910 ntBASIC13.27□□□□□ -0.29
NR4A2P43354 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.27□□□□□ -0.29
NR4A2P43354 AL162726.2-201ENST00000438986 1017 ntBASIC13.27□□□□□ -0.29
NR4A2P43354 TARDBPP1-201ENST00000442013 1203 ntBASIC13.27□□□□□ -0.29
NR4A2P43354 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.27□□□□□ -0.29
NR4A2P43354 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.27□□□□□ -0.29
NR4A2P43354 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.27□□□□□ -0.29
NR4A2P43354 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.27□□□□□ -0.29
NR4A2P43354 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.27□□□□□ -0.29
NR4A2P43354 AP005482.1-201ENST00000563722 1273 ntBASIC13.27□□□□□ -0.29
NR4A2P43354 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.27□□□□□ -0.29
NR4A2P43354 AL391069.4-201ENST00000609583 481 ntBASIC13.27□□□□□ -0.29
NR4A2P43354 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.27□□□□□ -0.29
NR4A2P43354 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.27□□□□□ -0.29
NR4A2P43354 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.27□□□□□ -0.29
NR4A2P43354 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
NR4A2P43354 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
NR4A2P43354 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NR4A2P43354 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC13.27□□□□□ -0.29
NR4A2P43354 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NR4A2P43354 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.27□□□□□ -0.29
NR4A2P43354 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NR4A2P43354 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.27□□□□□ -0.29
NR4A2P43354 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
NR4A2P43354 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
NR4A2P43354 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NR4A2P43354 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
NR4A2P43354 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NR4A2P43354 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
NR4A2P43354 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms