Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
SLC6A4P31645 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SLC6A4P31645 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A4P31645 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.79□□□□□ -0.04
SLC6A4P31645 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SLC6A4P31645 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A4P31645 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SLC6A4P31645 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC14.79□□□□□ -0.04
SLC6A4P31645 AC007191.1-201ENST00000623179 2995 ntBASIC14.79□□□□□ -0.04
SLC6A4P31645 AC006453.1-201ENST00000636037 1257 ntBASIC14.79□□□□□ -0.04
SLC6A4P31645 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A4P31645 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SLC6A4P31645 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A4P31645 AC023908.3-201ENST00000564211 3047 ntBASIC14.79□□□□□ -0.04
SLC6A4P31645 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC6A4P31645 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
SLC6A4P31645 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A4P31645 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A4P31645 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A4P31645 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.78□□□□□ -0.04
SLC6A4P31645 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A4P31645 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A4P31645 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A4P31645 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A4P31645 CICP16-201ENST00000502609 2813 ntBASIC14.78□□□□□ -0.04
SLC6A4P31645 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A4P31645 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A4P31645 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A4P31645 OR8T1P-201ENST00000421347 918 ntBASIC14.78□□□□□ -0.04
SLC6A4P31645 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A4P31645 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.78□□□□□ -0.04
SLC6A4P31645 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.78□□□□□ -0.04
SLC6A4P31645 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.78□□□□□ -0.04
SLC6A4P31645 RPSAP15-201ENST00000448168 861 ntBASIC14.78□□□□□ -0.04
SLC6A4P31645 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.78□□□□□ -0.04
SLC6A4P31645 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A4P31645 RN7SL67P-201ENST00000492147 296 ntBASIC14.78□□□□□ -0.04
SLC6A4P31645 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC14.78□□□□□ -0.04
SLC6A4P31645 MIR3677-201ENST00000578964 60 ntBASIC14.78□□□□□ -0.04
SLC6A4P31645 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SLC6A4P31645 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.78□□□□□ -0.04
SLC6A4P31645 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
SLC6A4P31645 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC6A4P31645 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.78□□□□□ -0.04
SLC6A4P31645 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A4P31645 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A4P31645 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A4P31645 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A4P31645 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A4P31645 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A4P31645 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SLC6A4P31645 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A4P31645 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
SLC6A4P31645 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A4P31645 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC6A4P31645 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
SLC6A4P31645 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SLC6A4P31645 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
SLC6A4P31645 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC6A4P31645 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.77□□□□□ -0.04
SLC6A4P31645 AC020910.6-201ENST00000623084 1459 ntBASIC14.77□□□□□ -0.04
SLC6A4P31645 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC6A4P31645 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC6A4P31645 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC6A4P31645 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SLC6A4P31645 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC6A4P31645 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.77□□□□□ -0.04
SLC6A4P31645 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC6A4P31645 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.77□□□□□ -0.04
SLC6A4P31645 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC6A4P31645 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC6A4P31645 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC6A4P31645 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.77□□□□□ -0.04
SLC6A4P31645 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC6A4P31645 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC6A4P31645 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC6A4P31645 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.77□□□□□ -0.05
SLC6A4P31645 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC14.77□□□□□ -0.05
SLC6A4P31645 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.77□□□□□ -0.05
SLC6A4P31645 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14.77□□□□□ -0.05
SLC6A4P31645 IGLV3-15-201ENST00000518356 244 ntBASIC14.77□□□□□ -0.05
SLC6A4P31645 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
SLC6A4P31645 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
SLC6A4P31645 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.77□□□□□ -0.05
SLC6A4P31645 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.77□□□□□ -0.05
SLC6A4P31645 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC6A4P31645 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SLC6A4P31645 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
SLC6A4P31645 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC6A4P31645 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC6A4P31645 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC6A4P31645 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.77□□□□□ -0.05
SLC6A4P31645 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
SLC6A4P31645 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
SLC6A4P31645 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.77□□□□□ -0.05
SLC6A4P31645 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SLC6A4P31645 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SLC6A4P31645 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SLC6A4P31645 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A4P31645 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms