Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.47□□□□□ -0.25
LCN1P31025 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LCN1P31025 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.47□□□□□ -0.25
LCN1P31025 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LCN1P31025 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LCN1P31025 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LCN1P31025 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.47□□□□□ -0.25
LCN1P31025 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LCN1P31025 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.47□□□□□ -0.25
LCN1P31025 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LCN1P31025 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.47□□□□□ -0.25
LCN1P31025 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LCN1P31025 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
LCN1P31025 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LCN1P31025 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
LCN1P31025 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.47□□□□□ -0.25
LCN1P31025 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LCN1P31025 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
LCN1P31025 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LCN1P31025 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
LCN1P31025 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.47□□□□□ -0.25
LCN1P31025 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.47□□□□□ -0.25
LCN1P31025 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LCN1P31025 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.47□□□□□ -0.25
LCN1P31025 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
LCN1P31025 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LCN1P31025 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
LCN1P31025 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.46□□□□□ -0.25
LCN1P31025 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LCN1P31025 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LCN1P31025 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.46□□□□□ -0.25
LCN1P31025 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.46□□□□□ -0.25
LCN1P31025 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LCN1P31025 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
LCN1P31025 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LCN1P31025 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LCN1P31025 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LCN1P31025 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LCN1P31025 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LCN1P31025 COL6A4P2-202ENST00000504443 2753 ntBASIC13.46□□□□□ -0.25
LCN1P31025 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.46□□□□□ -0.25
LCN1P31025 AC152010.1-201ENST00000415779 2006 ntBASIC13.46□□□□□ -0.25
LCN1P31025 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.46□□□□□ -0.25
LCN1P31025 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
LCN1P31025 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.46□□□□□ -0.25
LCN1P31025 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LCN1P31025 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
LCN1P31025 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.46□□□□□ -0.25
LCN1P31025 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
LCN1P31025 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.46□□□□□ -0.25
LCN1P31025 MIR658-201ENST00000385210 100 ntBASIC13.46□□□□□ -0.25
LCN1P31025 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LCN1P31025 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.46□□□□□ -0.25
LCN1P31025 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.46□□□□□ -0.25
LCN1P31025 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.46□□□□□ -0.25
LCN1P31025 AL161932.2-201ENST00000435436 679 ntBASIC13.46□□□□□ -0.25
LCN1P31025 ATP5G2P4-201ENST00000442175 420 ntBASIC13.46□□□□□ -0.25
LCN1P31025 TUBB8P8-201ENST00000458717 1058 ntBASIC13.46□□□□□ -0.25
LCN1P31025 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.46□□□□□ -0.25
LCN1P31025 AC010328.2-201ENST00000597698 1111 ntBASIC13.46□□□□□ -0.25
LCN1P31025 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.46□□□□□ -0.25
LCN1P31025 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LCN1P31025 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
LCN1P31025 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LCN1P31025 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.46□□□□□ -0.25
LCN1P31025 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LCN1P31025 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LCN1P31025 AC020910.6-201ENST00000623084 1459 ntBASIC13.46□□□□□ -0.25
LCN1P31025 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.46□□□□□ -0.25
LCN1P31025 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.46□□□□□ -0.25
LCN1P31025 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.46□□□□□ -0.25
LCN1P31025 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.46□□□□□ -0.26
LCN1P31025 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LCN1P31025 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LCN1P31025 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LCN1P31025 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.26
LCN1P31025 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.26
LCN1P31025 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LCN1P31025 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LCN1P31025 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.26
LCN1P31025 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.46□□□□□ -0.26
LCN1P31025 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.46□□□□□ -0.26
LCN1P31025 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LCN1P31025 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.46□□□□□ -0.26
LCN1P31025 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
LCN1P31025 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LCN1P31025 TCAF1P1-201ENST00000414990 2232 ntBASIC13.45□□□□□ -0.26
LCN1P31025 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.45□□□□□ -0.26
LCN1P31025 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.45□□□□□ -0.26
LCN1P31025 DGCR9-201ENST00000609630 2415 ntBASIC13.45□□□□□ -0.26
LCN1P31025 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LCN1P31025 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LCN1P31025 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LCN1P31025 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LCN1P31025 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LCN1P31025 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LCN1P31025 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LCN1P31025 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LCN1P31025 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LCN1P31025 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms