Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AMT-256ENST00000638063 1783 ntTSL 5 BASIC18.33■□□□□ 0.53
RXRBP28702 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RXRBP28702 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RXRBP28702 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RXRBP28702 AL031577.1-201ENST00000339867 399 ntBASIC18.33■□□□□ 0.52
RXRBP28702 RNF7-202ENST00000393000 805 ntTSL 2 BASIC18.33■□□□□ 0.52
RXRBP28702 NAA10-205ENST00000393712 908 ntTSL 5 BASIC18.33■□□□□ 0.52
RXRBP28702 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC18.33■□□□□ 0.52
RXRBP28702 RPSAP61-201ENST00000412542 878 ntBASIC18.33■□□□□ 0.52
RXRBP28702 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RXRBP28702 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC18.33■□□□□ 0.52
RXRBP28702 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC18.33■□□□□ 0.52
RXRBP28702 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC18.33■□□□□ 0.52
RXRBP28702 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC18.33■□□□□ 0.52
RXRBP28702 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
RXRBP28702 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
RXRBP28702 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC18.33■□□□□ 0.52
RXRBP28702 AL121992.3-201ENST00000606186 346 ntBASIC18.33■□□□□ 0.52
RXRBP28702 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RXRBP28702 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RXRBP28702 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.33■□□□□ 0.52
RXRBP28702 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RXRBP28702 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RXRBP28702 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
RXRBP28702 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RXRBP28702 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.33■□□□□ 0.52
RXRBP28702 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.33■□□□□ 0.52
RXRBP28702 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RXRBP28702 AC090616.6-203ENST00000579186 1945 ntBASIC18.33■□□□□ 0.52
RXRBP28702 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
RXRBP28702 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.33■□□□□ 0.52
RXRBP28702 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
RXRBP28702 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RXRBP28702 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RXRBP28702 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RXRBP28702 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RXRBP28702 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
RXRBP28702 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RXRBP28702 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RXRBP28702 RNF4-216ENST00000511859 1373 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RXRBP28702 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RXRBP28702 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.32■□□□□ 0.52
RXRBP28702 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RXRBP28702 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RXRBP28702 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RXRBP28702 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RXRBP28702 OR10K2-201ENST00000314902 939 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
RXRBP28702 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC18.32■□□□□ 0.52
RXRBP28702 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC18.32■□□□□ 0.52
RXRBP28702 TMEM256P1-201ENST00000430550 340 ntBASIC18.32■□□□□ 0.52
RXRBP28702 KRT18P42-201ENST00000505048 1255 ntBASIC18.32■□□□□ 0.52
RXRBP28702 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC18.32■□□□□ 0.52
RXRBP28702 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RXRBP28702 MED25-209ENST00000612791 881 ntTSL 5 BASIC18.32■□□□□ 0.52
RXRBP28702 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.32■□□□□ 0.52
RXRBP28702 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC18.32■□□□□ 0.52
RXRBP28702 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RXRBP28702 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RXRBP28702 AC015813.5-201ENST00000624641 1514 ntBASIC18.32■□□□□ 0.52
RXRBP28702 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.32■□□□□ 0.52
RXRBP28702 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RXRBP28702 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RXRBP28702 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC18.32■□□□□ 0.52
RXRBP28702 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RXRBP28702 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RXRBP28702 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RXRBP28702 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RXRBP28702 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RXRBP28702 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RXRBP28702 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RXRBP28702 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.31■□□□□ 0.52
RXRBP28702 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
RXRBP28702 TRIQK-219ENST00000523580 1630 ntTSL 2 BASIC18.31■□□□□ 0.52
RXRBP28702 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RXRBP28702 SARS-202ENST00000369923 1882 ntTSL 5 BASIC18.31■□□□□ 0.52
RXRBP28702 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC18.31■□□□□ 0.52
RXRBP28702 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RXRBP28702 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
RXRBP28702 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC18.31■□□□□ 0.52
RXRBP28702 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RXRBP28702 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.31■□□□□ 0.52
RXRBP28702 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.31■□□□□ 0.52
RXRBP28702 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC18.31■□□□□ 0.52
RXRBP28702 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC18.31■□□□□ 0.52
RXRBP28702 RPL3P9-201ENST00000463217 1183 ntBASIC18.31■□□□□ 0.52
RXRBP28702 RN7SL479P-201ENST00000472003 300 ntBASIC18.31■□□□□ 0.52
RXRBP28702 AL353708.1-201ENST00000567904 1257 ntBASIC18.31■□□□□ 0.52
RXRBP28702 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC18.31■□□□□ 0.52
RXRBP28702 AC006273.1-201ENST00000606966 861 ntBASIC18.31■□□□□ 0.52
RXRBP28702 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC18.31■□□□□ 0.52
RXRBP28702 MECP2-226ENST00000640414 897 ntTSL 5 BASIC18.31■□□□□ 0.52
RXRBP28702 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC18.31■□□□□ 0.52
RXRBP28702 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RXRBP28702 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RXRBP28702 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RXRBP28702 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.31■□□□□ 0.52
RXRBP28702 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RXRBP28702 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
RXRBP28702 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RXRBP28702 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms