Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 AL731571.1-201ENST00000617058 5428 ntBASIC12.65□□□□□ -0.38
ACKR3P25106 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
ACKR3P25106 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
ACKR3P25106 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
ACKR3P25106 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
ACKR3P25106 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.65□□□□□ -0.38
ACKR3P25106 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
ACKR3P25106 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
ACKR3P25106 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
ACKR3P25106 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ACKR3P25106 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
ACKR3P25106 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ACKR3P25106 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ACKR3P25106 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ACKR3P25106 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.65□□□□□ -0.38
ACKR3P25106 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ACKR3P25106 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
ACKR3P25106 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.65□□□□□ -0.38
ACKR3P25106 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
ACKR3P25106 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.39
ACKR3P25106 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
ACKR3P25106 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
ACKR3P25106 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.65□□□□□ -0.39
ACKR3P25106 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.65□□□□□ -0.39
ACKR3P25106 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
ACKR3P25106 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ACKR3P25106 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.64□□□□□ -0.39
ACKR3P25106 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.64□□□□□ -0.39
ACKR3P25106 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ACKR3P25106 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
ACKR3P25106 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
ACKR3P25106 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ACKR3P25106 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.64□□□□□ -0.39
ACKR3P25106 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ACKR3P25106 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ACKR3P25106 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
ACKR3P25106 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.64□□□□□ -0.39
ACKR3P25106 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
ACKR3P25106 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
ACKR3P25106 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ACKR3P25106 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
ACKR3P25106 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC12.64□□□□□ -0.39
ACKR3P25106 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
ACKR3P25106 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ACKR3P25106 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ACKR3P25106 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ACKR3P25106 NME2P1-201ENST00000426182 414 ntBASIC12.64□□□□□ -0.39
ACKR3P25106 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC12.64□□□□□ -0.39
ACKR3P25106 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.64□□□□□ -0.39
ACKR3P25106 COX5BP1-201ENST00000507622 393 ntBASIC12.64□□□□□ -0.39
ACKR3P25106 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.64□□□□□ -0.39
ACKR3P25106 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
ACKR3P25106 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ACKR3P25106 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC12.64□□□□□ -0.39
ACKR3P25106 RN7SL713P-201ENST00000582127 302 ntBASIC12.64□□□□□ -0.39
ACKR3P25106 AL358472.3-201ENST00000608147 415 ntBASIC12.64□□□□□ -0.39
ACKR3P25106 CECR7-204ENST00000609932 568 ntTSL 2 BASIC12.64□□□□□ -0.39
ACKR3P25106 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.64□□□□□ -0.39
ACKR3P25106 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
ACKR3P25106 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ACKR3P25106 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
ACKR3P25106 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ACKR3P25106 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
ACKR3P25106 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ACKR3P25106 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
ACKR3P25106 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.64□□□□□ -0.39
ACKR3P25106 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ACKR3P25106 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ACKR3P25106 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ACKR3P25106 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ACKR3P25106 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.64□□□□□ -0.39
ACKR3P25106 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ACKR3P25106 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
ACKR3P25106 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ACKR3P25106 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
ACKR3P25106 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ACKR3P25106 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ACKR3P25106 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.64□□□□□ -0.39
ACKR3P25106 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.64□□□□□ -0.39
ACKR3P25106 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ACKR3P25106 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.63□□□□□ -0.39
ACKR3P25106 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ACKR3P25106 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ACKR3P25106 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.63□□□□□ -0.39
ACKR3P25106 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ACKR3P25106 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ACKR3P25106 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ACKR3P25106 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.63□□□□□ -0.39
ACKR3P25106 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ACKR3P25106 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.63□□□□□ -0.39
ACKR3P25106 TCAM1P-207ENST00000485295 1537 ntBASIC12.63□□□□□ -0.39
ACKR3P25106 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
ACKR3P25106 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
ACKR3P25106 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.63□□□□□ -0.39
ACKR3P25106 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.63□□□□□ -0.39
ACKR3P25106 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
ACKR3P25106 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
ACKR3P25106 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ACKR3P25106 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
ACKR3P25106 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms