Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERCC2P18074 ST20-AS1-201ENST00000560255 4223 ntBASIC14.89□□□□□ -0.03
ERCC2P18074 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
ERCC2P18074 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERCC2P18074 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ERCC2P18074 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERCC2P18074 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ERCC2P18074 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.89□□□□□ -0.03
ERCC2P18074 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.89□□□□□ -0.03
ERCC2P18074 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERCC2P18074 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
ERCC2P18074 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
ERCC2P18074 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERCC2P18074 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
ERCC2P18074 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERCC2P18074 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.88□□□□□ -0.03
ERCC2P18074 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERCC2P18074 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.88□□□□□ -0.03
ERCC2P18074 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ERCC2P18074 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
ERCC2P18074 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ERCC2P18074 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ERCC2P18074 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERCC2P18074 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERCC2P18074 AC011474.4-201ENST00000623523 2076 ntBASIC14.88□□□□□ -0.03
ERCC2P18074 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERCC2P18074 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.88□□□□□ -0.03
ERCC2P18074 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERCC2P18074 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERCC2P18074 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERCC2P18074 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.88□□□□□ -0.03
ERCC2P18074 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.88□□□□□ -0.03
ERCC2P18074 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
ERCC2P18074 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.88□□□□□ -0.03
ERCC2P18074 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ERCC2P18074 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ERCC2P18074 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERCC2P18074 DPM3-202ENST00000368399 517 ntBASIC14.88□□□□□ -0.03
ERCC2P18074 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERCC2P18074 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.88□□□□□ -0.03
ERCC2P18074 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.88□□□□□ -0.03
ERCC2P18074 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.88□□□□□ -0.03
ERCC2P18074 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
ERCC2P18074 AC104306.2-201ENST00000451877 341 ntBASIC14.88□□□□□ -0.03
ERCC2P18074 AC104073.2-201ENST00000453737 312 ntBASIC14.88□□□□□ -0.03
ERCC2P18074 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.88□□□□□ -0.03
ERCC2P18074 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.88□□□□□ -0.03
ERCC2P18074 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.88□□□□□ -0.03
ERCC2P18074 AC022217.1-201ENST00000521069 738 ntBASIC14.88□□□□□ -0.03
ERCC2P18074 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.88□□□□□ -0.03
ERCC2P18074 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.88□□□□□ -0.03
ERCC2P18074 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.88□□□□□ -0.03
ERCC2P18074 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.88□□□□□ -0.03
ERCC2P18074 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.88□□□□□ -0.03
ERCC2P18074 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ERCC2P18074 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ERCC2P18074 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.88□□□□□ -0.03
ERCC2P18074 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ERCC2P18074 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.88□□□□□ -0.03
ERCC2P18074 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERCC2P18074 KRT8P24-201ENST00000560290 1559 ntBASIC14.88□□□□□ -0.03
ERCC2P18074 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
ERCC2P18074 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.88□□□□□ -0.03
ERCC2P18074 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ERCC2P18074 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERCC2P18074 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERCC2P18074 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.88□□□□□ -0.03
ERCC2P18074 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.88□□□□□ -0.03
ERCC2P18074 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.88□□□□□ -0.03
ERCC2P18074 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.88□□□□□ -0.03
ERCC2P18074 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERCC2P18074 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ERCC2P18074 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ERCC2P18074 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ERCC2P18074 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.87□□□□□ -0.03
ERCC2P18074 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERCC2P18074 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERCC2P18074 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.87□□□□□ -0.03
ERCC2P18074 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERCC2P18074 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ERCC2P18074 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERCC2P18074 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ERCC2P18074 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.87□□□□□ -0.03
ERCC2P18074 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERCC2P18074 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
ERCC2P18074 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERCC2P18074 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
ERCC2P18074 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.87□□□□□ -0.03
ERCC2P18074 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ERCC2P18074 AC018629.1-201ENST00000623381 1736 ntBASIC14.87□□□□□ -0.03
ERCC2P18074 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERCC2P18074 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERCC2P18074 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
ERCC2P18074 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERCC2P18074 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.87□□□□□ -0.03
ERCC2P18074 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.87□□□□□ -0.03
ERCC2P18074 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.87□□□□□ -0.03
ERCC2P18074 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.87□□□□□ -0.03
ERCC2P18074 ACTBP11-201ENST00000436287 1126 ntBASIC14.87□□□□□ -0.03
ERCC2P18074 XBP1P1-201ENST00000436573 652 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms