Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13□□□□□ -0.33
HLA-DOBP13765 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DOBP13765 OR8S1-201ENST00000310194 1080 ntBASIC13□□□□□ -0.33
HLA-DOBP13765 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13□□□□□ -0.33
HLA-DOBP13765 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13□□□□□ -0.33
HLA-DOBP13765 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13□□□□□ -0.33
HLA-DOBP13765 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13□□□□□ -0.33
HLA-DOBP13765 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13□□□□□ -0.33
HLA-DOBP13765 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13□□□□□ -0.33
HLA-DOBP13765 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
HLA-DOBP13765 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13□□□□□ -0.33
HLA-DOBP13765 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13□□□□□ -0.33
HLA-DOBP13765 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13□□□□□ -0.33
HLA-DOBP13765 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13□□□□□ -0.33
HLA-DOBP13765 AC010328.2-201ENST00000597698 1111 ntBASIC13□□□□□ -0.33
HLA-DOBP13765 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13□□□□□ -0.33
HLA-DOBP13765 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13□□□□□ -0.33
HLA-DOBP13765 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13□□□□□ -0.33
HLA-DOBP13765 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DOBP13765 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DOBP13765 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DOBP13765 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13□□□□□ -0.33
HLA-DOBP13765 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DOBP13765 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13□□□□□ -0.33
HLA-DOBP13765 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DOBP13765 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
HLA-DOBP13765 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DOBP13765 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13□□□□□ -0.33
HLA-DOBP13765 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DOBP13765 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13□□□□□ -0.33
HLA-DOBP13765 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DOBP13765 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DOBP13765 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
HLA-DOBP13765 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13□□□□□ -0.33
HLA-DOBP13765 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13□□□□□ -0.33
HLA-DOBP13765 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
HLA-DOBP13765 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DOBP13765 LINC02486-201ENST00000604157 3000 ntBASIC12.99□□□□□ -0.33
HLA-DOBP13765 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DOBP13765 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.99□□□□□ -0.33
HLA-DOBP13765 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DOBP13765 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DOBP13765 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DOBP13765 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
HLA-DOBP13765 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DOBP13765 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DOBP13765 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.99□□□□□ -0.33
HLA-DOBP13765 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
HLA-DOBP13765 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DOBP13765 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DOBP13765 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DOBP13765 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
HLA-DOBP13765 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
HLA-DOBP13765 AL157996.1-201ENST00000624684 2299 ntBASIC12.99□□□□□ -0.33
HLA-DOBP13765 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DOBP13765 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
HLA-DOBP13765 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.99□□□□□ -0.33
HLA-DOBP13765 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.99□□□□□ -0.33
HLA-DOBP13765 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DOBP13765 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DOBP13765 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC12.99□□□□□ -0.33
HLA-DOBP13765 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DOBP13765 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.99□□□□□ -0.33
HLA-DOBP13765 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
HLA-DOBP13765 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC12.99□□□□□ -0.33
HLA-DOBP13765 AC100827.2-201ENST00000563214 1194 ntBASIC12.99□□□□□ -0.33
HLA-DOBP13765 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC12.99□□□□□ -0.33
HLA-DOBP13765 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC12.99□□□□□ -0.33
HLA-DOBP13765 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC12.99□□□□□ -0.33
HLA-DOBP13765 AC239800.4-201ENST00000603712 296 ntBASIC12.99□□□□□ -0.33
HLA-DOBP13765 AC104506.1-201ENST00000609247 429 ntBASIC12.99□□□□□ -0.33
HLA-DOBP13765 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DOBP13765 AL162426.1-201ENST00000624141 743 ntBASIC12.99□□□□□ -0.33
HLA-DOBP13765 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.99□□□□□ -0.33
HLA-DOBP13765 Z98259.2-201ENST00000641583 609 ntBASIC12.99□□□□□ -0.33
HLA-DOBP13765 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DOBP13765 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DOBP13765 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DOBP13765 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
HLA-DOBP13765 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DOBP13765 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
HLA-DOBP13765 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DOBP13765 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DOBP13765 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DOBP13765 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.99□□□□□ -0.33
HLA-DOBP13765 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.99□□□□□ -0.33
HLA-DOBP13765 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DOBP13765 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DOBP13765 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DOBP13765 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DOBP13765 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.99□□□□□ -0.33
HLA-DOBP13765 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
HLA-DOBP13765 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DOBP13765 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-DOBP13765 CICP4-201ENST00000447359 2812 ntBASIC12.98□□□□□ -0.33
HLA-DOBP13765 AC015818.8-201ENST00000587907 1519 ntBASIC12.98□□□□□ -0.33
HLA-DOBP13765 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DOBP13765 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DOBP13765 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DOBP13765 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms