Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 AC112694.1-202ENST00000540985 943 ntBASIC8.88□□□□□ -0.99
PKHD1P08F94 KRT127P-201ENST00000547183 433 ntBASIC8.88□□□□□ -0.99
PKHD1P08F94 AC027279.2-201ENST00000561938 793 ntTSL 5 BASIC8.88□□□□□ -0.99
PKHD1P08F94 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC8.88□□□□□ -0.99
PKHD1P08F94 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC8.88□□□□□ -0.99
PKHD1P08F94 LINC02193-207ENST00000621799 723 ntTSL 5 BASIC8.88□□□□□ -0.99
PKHD1P08F94 AC069287.1-202ENST00000622626 723 ntTSL 5 BASIC8.88□□□□□ -0.99
PKHD1P08F94 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
PKHD1P08F94 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC8.88□□□□□ -0.99
PKHD1P08F94 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC8.88□□□□□ -0.99
PKHD1P08F94 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
PKHD1P08F94 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC8.88□□□□□ -0.99
PKHD1P08F94 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
PKHD1P08F94 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
PKHD1P08F94 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
PKHD1P08F94 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
PKHD1P08F94 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
PKHD1P08F94 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
PKHD1P08F94 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC8.88□□□□□ -0.99
PKHD1P08F94 NDUFB2P1-201ENST00000506966 295 ntBASIC8.88□□□□□ -0.99
PKHD1P08F94 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
PKHD1P08F94 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC8.88□□□□□ -0.99
PKHD1P08F94 PDLIM1P1-201ENST00000604187 969 ntBASIC8.88□□□□□ -0.99
PKHD1P08F94 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
PKHD1P08F94 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC8.88□□□□□ -0.99
PKHD1P08F94 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
PKHD1P08F94 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
PKHD1P08F94 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
PKHD1P08F94 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC8.88□□□□□ -0.99
PKHD1P08F94 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC8.88□□□□□ -0.99
PKHD1P08F94 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
PKHD1P08F94 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
PKHD1P08F94 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
PKHD1P08F94 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
PKHD1P08F94 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
PKHD1P08F94 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC8.88□□□□□ -0.99
PKHD1P08F94 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC8.88□□□□□ -0.99
PKHD1P08F94 ASLP1-201ENST00000428790 637 ntBASIC8.88□□□□□ -0.99
PKHD1P08F94 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC8.88□□□□□ -0.99
PKHD1P08F94 AC008267.3-201ENST00000448776 712 ntBASIC8.88□□□□□ -0.99
PKHD1P08F94 RNA5SP288-201ENST00000516075 93 ntBASIC8.88□□□□□ -0.99
PKHD1P08F94 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC8.88□□□□□ -0.99
PKHD1P08F94 MIR7704-201ENST00000610524 59 ntBASIC8.88□□□□□ -0.99
PKHD1P08F94 CDIPT-AS1-203ENST00000638164 713 ntBASIC8.88□□□□□ -0.99
PKHD1P08F94 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC8.88□□□□□ -0.99
PKHD1P08F94 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC8.87□□□□□ -0.99
PKHD1P08F94 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC8.87□□□□□ -0.99
PKHD1P08F94 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
PKHD1P08F94 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC8.87□□□□□ -0.99
PKHD1P08F94 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
PKHD1P08F94 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
PKHD1P08F94 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
PKHD1P08F94 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
PKHD1P08F94 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
PKHD1P08F94 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
PKHD1P08F94 POLR3DP1-201ENST00000398689 1176 ntBASIC8.87□□□□□ -0.99
PKHD1P08F94 Z84721.1-201ENST00000438841 372 ntBASIC8.87□□□□□ -0.99
PKHD1P08F94 RN7SL794P-201ENST00000469816 280 ntBASIC8.87□□□□□ -0.99
PKHD1P08F94 RN7SL47P-201ENST00000488710 299 ntBASIC8.87□□□□□ -0.99
PKHD1P08F94 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC8.87□□□□□ -0.99
PKHD1P08F94 BX510359.7-201ENST00000619819 630 ntBASIC8.87□□□□□ -0.99
PKHD1P08F94 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
PKHD1P08F94 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
PKHD1P08F94 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
PKHD1P08F94 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
PKHD1P08F94 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
PKHD1P08F94 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
PKHD1P08F94 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
PKHD1P08F94 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
PKHD1P08F94 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
PKHD1P08F94 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
PKHD1P08F94 SFPQP1-201ENST00000446621 1786 ntBASIC8.87□□□□□ -0.99
PKHD1P08F94 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
PKHD1P08F94 TP73-207ENST00000378290 1831 ntTSL 2 BASIC8.87□□□□□ -0.99
PKHD1P08F94 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
PKHD1P08F94 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
PKHD1P08F94 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
PKHD1P08F94 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC8.87□□□□□ -0.99
PKHD1P08F94 OR2W2P-201ENST00000406313 909 ntBASIC8.87□□□□□ -0.99
PKHD1P08F94 AP001331.1-201ENST00000413008 1015 ntBASIC8.87□□□□□ -0.99
PKHD1P08F94 AC104117.4-201ENST00000521486 847 ntBASIC8.87□□□□□ -0.99
PKHD1P08F94 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC8.87□□□□□ -0.99
PKHD1P08F94 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC8.87□□□□□ -0.99
PKHD1P08F94 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
PKHD1P08F94 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
PKHD1P08F94 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
PKHD1P08F94 COMMD10-207ENST00000632434 1433 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
PKHD1P08F94 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
PKHD1P08F94 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
PKHD1P08F94 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC8.87□□□□□ -0.99
PKHD1P08F94 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
PKHD1P08F94 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
PKHD1P08F94 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
PKHD1P08F94 TUBB2BP1-201ENST00000404155 871 ntBASIC8.87□□□□□ -0.99
PKHD1P08F94 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC8.87□□□□□ -0.99
PKHD1P08F94 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC8.87□□□□□ -0.99
PKHD1P08F94 AC123912.6-201ENST00000612657 315 ntBASIC8.87□□□□□ -0.99
PKHD1P08F94 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC8.87□□□□□ -0.99
PKHD1P08F94 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC8.87□□□□□ -0.99
PKHD1P08F94 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms