Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRBV12-3P01733 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
TRBV12-3P01733 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC11.21□□□□□ -0.62
TRBV12-3P01733 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
TRBV12-3P01733 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC11.21□□□□□ -0.62
TRBV12-3P01733 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRBV12-3P01733 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC11.21□□□□□ -0.62
TRBV12-3P01733 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRBV12-3P01733 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
TRBV12-3P01733 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
TRBV12-3P01733 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC11.2□□□□□ -0.62
TRBV12-3P01733 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC11.2□□□□□ -0.62
TRBV12-3P01733 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
TRBV12-3P01733 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC11.2□□□□□ -0.62
TRBV12-3P01733 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
TRBV12-3P01733 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
TRBV12-3P01733 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
TRBV12-3P01733 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC11.2□□□□□ -0.62
TRBV12-3P01733 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC11.2□□□□□ -0.62
TRBV12-3P01733 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
TRBV12-3P01733 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
TRBV12-3P01733 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 DPM3-202ENST00000368399 517 ntBASIC11.2□□□□□ -0.62
TRBV12-3P01733 NPPA-201ENST00000376476 728 ntTSL 3 BASIC11.2□□□□□ -0.62
TRBV12-3P01733 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC11.2□□□□□ -0.62
TRBV12-3P01733 AC006033.1-201ENST00000440505 426 ntBASIC11.2□□□□□ -0.62
TRBV12-3P01733 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
TRBV12-3P01733 AC099548.2-209ENST00000480264 625 ntBASIC11.2□□□□□ -0.62
TRBV12-3P01733 HLA-J-204ENST00000495278 958 ntBASIC11.2□□□□□ -0.62
TRBV12-3P01733 AC106794.1-201ENST00000506935 792 ntBASIC11.2□□□□□ -0.62
TRBV12-3P01733 AC005740.2-201ENST00000511085 419 ntBASIC11.2□□□□□ -0.62
TRBV12-3P01733 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
TRBV12-3P01733 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC11.2□□□□□ -0.62
TRBV12-3P01733 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC11.2□□□□□ -0.62
TRBV12-3P01733 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 RN7SL163P-201ENST00000583100 276 ntBASIC11.2□□□□□ -0.62
TRBV12-3P01733 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
TRBV12-3P01733 DIO1-215ENST00000610607 796 ntTSL 5 BASIC11.2□□□□□ -0.62
TRBV12-3P01733 GPR182-203ENST00000622922 591 ntBASIC11.2□□□□□ -0.62
TRBV12-3P01733 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC11.2□□□□□ -0.62
TRBV12-3P01733 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
TRBV12-3P01733 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
TRBV12-3P01733 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC11.2□□□□□ -0.62
TRBV12-3P01733 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC11.2□□□□□ -0.62
TRBV12-3P01733 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
TRBV12-3P01733 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC11.2□□□□□ -0.62
TRBV12-3P01733 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
TRBV12-3P01733 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRBV12-3P01733 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC11.2□□□□□ -0.62
TRBV12-3P01733 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
TRBV12-3P01733 USP4-203ENST00000415188 1454 ntTSL 3 BASIC11.19□□□□□ -0.62
TRBV12-3P01733 AC020910.6-201ENST00000623084 1459 ntBASIC11.19□□□□□ -0.62
TRBV12-3P01733 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
TRBV12-3P01733 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC11.19□□□□□ -0.62
TRBV12-3P01733 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
TRBV12-3P01733 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC11.19□□□□□ -0.62
TRBV12-3P01733 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms