Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LTAP01374 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
LTAP01374 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
LTAP01374 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LTAP01374 Z98257.2-202ENST00000641138 1548 ntBASIC10.94□□□□□ -0.66
LTAP01374 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC10.94□□□□□ -0.66
LTAP01374 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC10.94□□□□□ -0.66
LTAP01374 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LTAP01374 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC10.94□□□□□ -0.66
LTAP01374 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC10.94□□□□□ -0.66
LTAP01374 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
LTAP01374 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC10.93□□□□□ -0.66
LTAP01374 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC10.93□□□□□ -0.66
LTAP01374 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC10.93□□□□□ -0.66
LTAP01374 AC100757.3-201ENST00000622361 1406 ntBASIC10.93□□□□□ -0.66
LTAP01374 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 AC010970.1-201ENST00000445125 1848 ntBASIC10.93□□□□□ -0.66
LTAP01374 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
LTAP01374 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC10.93□□□□□ -0.66
LTAP01374 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC10.93□□□□□ -0.66
LTAP01374 TNN-202ENST00000621086 4234 ntTSL 5 BASIC10.93□□□□□ -0.66
LTAP01374 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC10.93□□□□□ -0.66
LTAP01374 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
LTAP01374 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC10.93□□□□□ -0.66
LTAP01374 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
LTAP01374 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
LTAP01374 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC10.93□□□□□ -0.66
LTAP01374 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC10.93□□□□□ -0.66
LTAP01374 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC10.93□□□□□ -0.66
LTAP01374 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC10.93□□□□□ -0.66
LTAP01374 AC134915.1-201ENST00000426461 574 ntBASIC10.93□□□□□ -0.66
LTAP01374 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC10.93□□□□□ -0.66
LTAP01374 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC10.93□□□□□ -0.66
LTAP01374 PUDPP3-201ENST00000445368 636 ntBASIC10.93□□□□□ -0.66
LTAP01374 AC009477.1-201ENST00000452936 217 ntBASIC10.93□□□□□ -0.66
LTAP01374 HLA-J-203ENST00000494367 1087 ntBASIC10.93□□□□□ -0.66
LTAP01374 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC10.93□□□□□ -0.66
LTAP01374 SPDYE18-201ENST00000510091 1050 ntBASIC10.93□□□□□ -0.66
LTAP01374 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC10.93□□□□□ -0.66
LTAP01374 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC10.93□□□□□ -0.66
LTAP01374 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 AC140878.1-201ENST00000565277 250 ntBASIC10.93□□□□□ -0.66
LTAP01374 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC10.93□□□□□ -0.66
LTAP01374 MIR3687-2-201ENST00000577708 61 ntBASIC10.93□□□□□ -0.66
LTAP01374 IFT20-206ENST00000578122 834 ntTSL 2 BASIC10.93□□□□□ -0.66
LTAP01374 IFT20-208ENST00000578985 831 ntTSL 3 BASIC10.93□□□□□ -0.66
LTAP01374 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC10.93□□□□□ -0.66
LTAP01374 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 MIR3687-1-201ENST00000614492 61 ntBASIC10.93□□□□□ -0.66
LTAP01374 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC10.93□□□□□ -0.66
LTAP01374 MVK-217ENST00000639206 367 ntTSL 5 BASIC10.93□□□□□ -0.66
LTAP01374 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
LTAP01374 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
LTAP01374 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 AL445250.1-201ENST00000641671 2259 ntBASIC10.93□□□□□ -0.66
LTAP01374 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 PDIA3P1-201ENST00000471856 1510 ntBASIC10.93□□□□□ -0.66
LTAP01374 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
LTAP01374 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
LTAP01374 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LTAP01374 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LTAP01374 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LTAP01374 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LTAP01374 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
LTAP01374 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LTAP01374 KRT8P28-201ENST00000433288 1390 ntBASIC10.92□□□□□ -0.66
LTAP01374 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LTAP01374 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LTAP01374 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC10.92□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms