Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC6.22□□□□□ -1.41
USH2AO75445 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
USH2AO75445 LILRP2-202ENST00000413572 1383 ntBASIC6.22□□□□□ -1.41
USH2AO75445 REG3A-201ENST00000305165 718 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
USH2AO75445 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC6.22□□□□□ -1.41
USH2AO75445 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
USH2AO75445 AC012066.1-201ENST00000439252 694 ntBASIC6.22□□□□□ -1.41
USH2AO75445 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC6.22□□□□□ -1.41
USH2AO75445 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC6.22□□□□□ -1.41
USH2AO75445 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC6.22□□□□□ -1.41
USH2AO75445 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC6.22□□□□□ -1.41
USH2AO75445 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC6.22□□□□□ -1.41
USH2AO75445 AP001505.1-201ENST00000569966 824 ntBASIC6.22□□□□□ -1.41
USH2AO75445 SRP9-205ENST00000626563 329 ntTSL 5 BASIC6.22□□□□□ -1.41
USH2AO75445 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
USH2AO75445 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
USH2AO75445 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
USH2AO75445 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC6.22□□□□□ -1.41
USH2AO75445 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC6.22□□□□□ -1.41
USH2AO75445 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC6.22□□□□□ -1.41
USH2AO75445 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
USH2AO75445 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
USH2AO75445 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
USH2AO75445 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
USH2AO75445 CRYGD-201ENST00000264376 619 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
USH2AO75445 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC6.22□□□□□ -1.41
USH2AO75445 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
USH2AO75445 LDHAL6CP-201ENST00000502352 1142 ntBASIC6.22□□□□□ -1.41
USH2AO75445 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
USH2AO75445 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
USH2AO75445 AC010547.1-202ENST00000567341 230 ntTSL 2 BASIC6.22□□□□□ -1.41
USH2AO75445 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC6.22□□□□□ -1.41
USH2AO75445 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC6.22□□□□□ -1.41
USH2AO75445 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
USH2AO75445 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
USH2AO75445 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
USH2AO75445 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
USH2AO75445 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
USH2AO75445 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC6.22□□□□□ -1.41
USH2AO75445 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
USH2AO75445 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
USH2AO75445 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
USH2AO75445 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC6.22□□□□□ -1.41
USH2AO75445 HSD3BP1-201ENST00000286193 1111 ntBASIC6.22□□□□□ -1.41
USH2AO75445 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
USH2AO75445 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
USH2AO75445 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
USH2AO75445 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
USH2AO75445 AC004112.1-201ENST00000431064 561 ntTSL 3 BASIC6.22□□□□□ -1.41
USH2AO75445 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC6.22□□□□□ -1.41
USH2AO75445 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC6.22□□□□□ -1.41
USH2AO75445 AC073465.1-201ENST00000456671 464 ntBASIC6.22□□□□□ -1.41
USH2AO75445 HAX1-211ENST00000532105 771 ntTSL 3 BASIC6.22□□□□□ -1.41
USH2AO75445 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC6.22□□□□□ -1.41
USH2AO75445 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
USH2AO75445 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC6.22□□□□□ -1.41
USH2AO75445 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
USH2AO75445 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
USH2AO75445 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC6.22□□□□□ -1.41
USH2AO75445 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
USH2AO75445 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC6.21□□□□□ -1.41
USH2AO75445 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
USH2AO75445 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC6.21□□□□□ -1.41
USH2AO75445 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
USH2AO75445 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
USH2AO75445 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC6.21□□□□□ -1.41
USH2AO75445 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC6.21□□□□□ -1.41
USH2AO75445 CASK-202ENST00000378158 3848 ntTSL 5 BASIC6.21□□□□□ -1.41
USH2AO75445 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC6.21□□□□□ -1.41
USH2AO75445 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
USH2AO75445 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
USH2AO75445 AL137077.1-201ENST00000442115 528 ntBASIC6.21□□□□□ -1.41
USH2AO75445 AC138781.1-201ENST00000501322 505 ntTSL 3 BASIC6.21□□□□□ -1.41
USH2AO75445 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC6.21□□□□□ -1.41
USH2AO75445 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC6.21□□□□□ -1.41
USH2AO75445 AC012313.2-201ENST00000599952 1154 ntTSL 5 BASIC6.21□□□□□ -1.41
USH2AO75445 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
USH2AO75445 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC6.21□□□□□ -1.41
USH2AO75445 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
USH2AO75445 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
USH2AO75445 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC6.21□□□□□ -1.41
USH2AO75445 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
USH2AO75445 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
USH2AO75445 PTAFR-201ENST00000305392 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
USH2AO75445 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
USH2AO75445 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
USH2AO75445 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
USH2AO75445 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
USH2AO75445 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
USH2AO75445 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
USH2AO75445 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
USH2AO75445 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
USH2AO75445 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
USH2AO75445 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
USH2AO75445 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
USH2AO75445 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
USH2AO75445 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
USH2AO75445 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC6.21□□□□□ -1.42
USH2AO75445 WAC-202ENST00000347934 2839 ntTSL 5 BASIC6.21□□□□□ -1.42
USH2AO75445 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms