Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIPK2O43353 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RIPK2O43353 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIPK2O43353 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RIPK2O43353 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RIPK2O43353 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RIPK2O43353 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC14.72□□□□□ -0.05
RIPK2O43353 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIPK2O43353 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
RIPK2O43353 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIPK2O43353 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIPK2O43353 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIPK2O43353 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIPK2O43353 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIPK2O43353 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIPK2O43353 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
RIPK2O43353 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIPK2O43353 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIPK2O43353 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.72□□□□□ -0.05
RIPK2O43353 FTLP10-202ENST00000505798 471 ntBASIC14.72□□□□□ -0.05
RIPK2O43353 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.72□□□□□ -0.05
RIPK2O43353 AC055876.2-201ENST00000531834 546 ntBASIC14.72□□□□□ -0.05
RIPK2O43353 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.72□□□□□ -0.05
RIPK2O43353 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIPK2O43353 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
RIPK2O43353 CLUHP6-201ENST00000580789 941 ntBASIC14.72□□□□□ -0.05
RIPK2O43353 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RIPK2O43353 AC093726.1-201ENST00000608064 963 ntBASIC14.72□□□□□ -0.05
RIPK2O43353 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIPK2O43353 ABCD1P2-201ENST00000429313 1601 ntBASIC14.72□□□□□ -0.05
RIPK2O43353 MEX3B-202ENST00000558133 4333 ntBASIC14.72□□□□□ -0.05
RIPK2O43353 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RIPK2O43353 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIPK2O43353 AP000593.2-201ENST00000542775 1433 ntBASIC14.72□□□□□ -0.05
RIPK2O43353 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.72□□□□□ -0.05
RIPK2O43353 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.72□□□□□ -0.05
RIPK2O43353 AC004623.1-201ENST00000624592 2127 ntBASIC14.72□□□□□ -0.05
RIPK2O43353 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIPK2O43353 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIPK2O43353 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
RIPK2O43353 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.72□□□□□ -0.05
RIPK2O43353 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIPK2O43353 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIPK2O43353 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.72□□□□□ -0.05
RIPK2O43353 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIPK2O43353 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIPK2O43353 SLC7A15P-201ENST00000424028 1363 ntBASIC14.72□□□□□ -0.05
RIPK2O43353 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RIPK2O43353 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RIPK2O43353 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC14.71□□□□□ -0.05
RIPK2O43353 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RIPK2O43353 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RIPK2O43353 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RIPK2O43353 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RIPK2O43353 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RIPK2O43353 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RIPK2O43353 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RIPK2O43353 AC024075.2-201ENST00000598112 1473 ntBASIC14.71□□□□□ -0.05
RIPK2O43353 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RIPK2O43353 CR383656.2-201ENST00000548656 2254 ntBASIC14.71□□□□□ -0.05
RIPK2O43353 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC14.71□□□□□ -0.05
RIPK2O43353 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RIPK2O43353 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RIPK2O43353 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RIPK2O43353 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
RIPK2O43353 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RIPK2O43353 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RIPK2O43353 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.71□□□□□ -0.05
RIPK2O43353 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RIPK2O43353 RN7SKP175-201ENST00000408472 289 ntBASIC14.71□□□□□ -0.05
RIPK2O43353 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.71□□□□□ -0.05
RIPK2O43353 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.71□□□□□ -0.05
RIPK2O43353 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.71□□□□□ -0.05
RIPK2O43353 AC093004.1-201ENST00000508850 424 ntBASIC14.71□□□□□ -0.05
RIPK2O43353 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.71□□□□□ -0.05
RIPK2O43353 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.71□□□□□ -0.05
RIPK2O43353 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.71□□□□□ -0.05
RIPK2O43353 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.71□□□□□ -0.05
RIPK2O43353 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RIPK2O43353 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RIPK2O43353 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RIPK2O43353 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC14.71□□□□□ -0.05
RIPK2O43353 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
RIPK2O43353 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RIPK2O43353 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RIPK2O43353 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RIPK2O43353 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
RIPK2O43353 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC14.71□□□□□ -0.05
RIPK2O43353 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC14.71□□□□□ -0.05
RIPK2O43353 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RIPK2O43353 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
RIPK2O43353 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
RIPK2O43353 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RIPK2O43353 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RIPK2O43353 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
RIPK2O43353 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RIPK2O43353 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
RIPK2O43353 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RIPK2O43353 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.7□□□□□ -0.06
RIPK2O43353 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms