Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 ELK2AP-201ENST00000392510 1007 ntBASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 PARP8-218ENST00000513738 596 ntTSL 4 BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 AC009779.1-201ENST00000551138 283 ntBASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 COG4-212ENST00000564653 590 ntTSL 5 BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPA2E9PIF3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 AL354702.1-201ENST00000442006 1960 ntBASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 FAM90A7P-201ENST00000382628 1395 ntBASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 FAM90A23P-201ENST00000400136 1395 ntBASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 AC006335.1-201ENST00000445200 547 ntBASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 MIR3907-201ENST00000579424 151 ntBASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 RN7SL190P-201ENST00000582519 257 ntBASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 AP000346.4-201ENST00000614827 381 ntBASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA2E9PIF3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA2E9PIF3 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
NPIPA2E9PIF3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
NPIPA2E9PIF3 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.22□□□□□ -0.29
NPIPA2E9PIF3 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA2E9PIF3 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13.22□□□□□ -0.29
NPIPA2E9PIF3 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms