Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 MARK2P16-201ENST00000605714 1723 ntBASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 CICP14-201ENST00000629111 2732 ntBASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 KRT8P31-201ENST00000504812 1408 ntBASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.4□□□□□ -0.11
TBC1D3FA6NER0 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
TBC1D3FA6NER0 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 AC092580.1-201ENST00000433998 658 ntBASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 SORD2P-201ENST00000558556 1069 ntBASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 AL031713.1-201ENST00000564813 661 ntBASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 AC087045.2-201ENST00000606279 1003 ntBASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 AC018635.2-201ENST00000608625 364 ntBASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 MIR6727-201ENST00000620702 65 ntBASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 AC090386.2-201ENST00000623010 1039 ntBASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 FGD5P1-202ENST00000614866 2498 ntBASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TBC1D3FA6NER0 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TBC1D3FA6NER0 AC215219.1-201ENST00000400706 1817 ntBASIC14.38□□□□□ -0.11
TBC1D3FA6NER0 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
TBC1D3FA6NER0 AGGF1P1-201ENST00000509500 2073 ntBASIC14.38□□□□□ -0.11
TBC1D3FA6NER0 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TBC1D3FA6NER0 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TBC1D3FA6NER0 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.38□□□□□ -0.11
TBC1D3FA6NER0 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
TBC1D3FA6NER0 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TBC1D3FA6NER0 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
TBC1D3FA6NER0 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TBC1D3FA6NER0 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TBC1D3FA6NER0 AC099063.4-201ENST00000641099 1602 ntBASIC14.38□□□□□ -0.11
TBC1D3FA6NER0 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms