Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RCCD1A6NED2 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC15.42■□□□□ 0.06
RCCD1A6NED2 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RCCD1A6NED2 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RCCD1A6NED2 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RCCD1A6NED2 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
RCCD1A6NED2 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.42■□□□□ 0.06
RCCD1A6NED2 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RCCD1A6NED2 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RCCD1A6NED2 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RCCD1A6NED2 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RCCD1A6NED2 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RCCD1A6NED2 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RCCD1A6NED2 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RCCD1A6NED2 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RCCD1A6NED2 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RCCD1A6NED2 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RCCD1A6NED2 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RCCD1A6NED2 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RCCD1A6NED2 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RCCD1A6NED2 AC097376.2-205ENST00000610159 5334 ntBASIC15.41■□□□□ 0.06
RCCD1A6NED2 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RCCD1A6NED2 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RCCD1A6NED2 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RCCD1A6NED2 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RCCD1A6NED2 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RCCD1A6NED2 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RCCD1A6NED2 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.41■□□□□ 0.06
RCCD1A6NED2 AL590640.2-201ENST00000457038 527 ntBASIC15.41■□□□□ 0.06
RCCD1A6NED2 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.41■□□□□ 0.06
RCCD1A6NED2 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.41■□□□□ 0.06
RCCD1A6NED2 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.41■□□□□ 0.06
RCCD1A6NED2 RNA5SP421-201ENST00000516864 134 ntBASIC15.41■□□□□ 0.06
RCCD1A6NED2 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.41■□□□□ 0.06
RCCD1A6NED2 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.41■□□□□ 0.06
RCCD1A6NED2 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.41■□□□□ 0.06
RCCD1A6NED2 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.41■□□□□ 0.06
RCCD1A6NED2 KRT8P2-201ENST00000556193 944 ntBASIC15.41■□□□□ 0.06
RCCD1A6NED2 AL353729.2-201ENST00000605859 1249 ntBASIC15.41■□□□□ 0.06
RCCD1A6NED2 AC004233.3-201ENST00000607794 1269 ntBASIC15.41■□□□□ 0.06
RCCD1A6NED2 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.41■□□□□ 0.06
RCCD1A6NED2 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
RCCD1A6NED2 AC002472.3-201ENST00000640124 621 ntBASIC15.41■□□□□ 0.06
RCCD1A6NED2 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RCCD1A6NED2 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RCCD1A6NED2 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RCCD1A6NED2 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RCCD1A6NED2 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RCCD1A6NED2 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RCCD1A6NED2 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RCCD1A6NED2 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.41■□□□□ 0.06
RCCD1A6NED2 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RCCD1A6NED2 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC15.41■□□□□ 0.06
RCCD1A6NED2 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RCCD1A6NED2 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RCCD1A6NED2 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RCCD1A6NED2 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RCCD1A6NED2 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RCCD1A6NED2 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RCCD1A6NED2 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC15.41■□□□□ 0.06
RCCD1A6NED2 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RCCD1A6NED2 DDC-214ENST00000622873 1839 ntTSL 3 BASIC15.4■□□□□ 0.06
RCCD1A6NED2 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
RCCD1A6NED2 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RCCD1A6NED2 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RCCD1A6NED2 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
RCCD1A6NED2 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RCCD1A6NED2 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RCCD1A6NED2 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RCCD1A6NED2 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RCCD1A6NED2 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RCCD1A6NED2 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
RCCD1A6NED2 AL445250.1-201ENST00000641671 2259 ntBASIC15.4■□□□□ 0.06
RCCD1A6NED2 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC15.4■□□□□ 0.06
RCCD1A6NED2 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
RCCD1A6NED2 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RCCD1A6NED2 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.4■□□□□ 0.06
RCCD1A6NED2 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
RCCD1A6NED2 MIR770-201ENST00000390219 98 ntBASIC15.4■□□□□ 0.06
RCCD1A6NED2 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.4■□□□□ 0.06
RCCD1A6NED2 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RCCD1A6NED2 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.4■□□□□ 0.06
RCCD1A6NED2 ACTG1P3-201ENST00000431775 1114 ntBASIC15.4■□□□□ 0.06
RCCD1A6NED2 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.4■□□□□ 0.06
RCCD1A6NED2 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.4■□□□□ 0.06
RCCD1A6NED2 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.4■□□□□ 0.06
RCCD1A6NED2 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RCCD1A6NED2 TSPY16P-201ENST00000449843 468 ntBASIC15.4■□□□□ 0.06
RCCD1A6NED2 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.4■□□□□ 0.06
RCCD1A6NED2 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.4■□□□□ 0.06
RCCD1A6NED2 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC15.4■□□□□ 0.06
RCCD1A6NED2 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.4■□□□□ 0.06
RCCD1A6NED2 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.4■□□□□ 0.06
RCCD1A6NED2 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.4■□□□□ 0.06
RCCD1A6NED2 OR10B1P-201ENST00000601666 907 ntBASIC15.4■□□□□ 0.06
RCCD1A6NED2 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.4■□□□□ 0.06
RCCD1A6NED2 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RCCD1A6NED2 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RCCD1A6NED2 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RCCD1A6NED2 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms