Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
HLA-DRB4X5D2U9 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 AC006001.1-201ENST00000325130 474 ntBASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 GZMB-202ENST00000382540 816 ntTSL 5 BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 AP000812.2-201ENST00000538934 718 ntBASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 BX088702.1-201ENST00000610784 235 ntBASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 AL162274.1-201ENST00000617191 1098 ntBASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 INE2-201ENST00000630399 1874 ntBASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
HLA-DRB4X5D2U9 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms