Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLF1Q9BQI6 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLF1Q9BQI6 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.84■□□□□ 0.29
SLF1Q9BQI6 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
SLF1Q9BQI6 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLF1Q9BQI6 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLF1Q9BQI6 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.83■□□□□ 0.29
SLF1Q9BQI6 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLF1Q9BQI6 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLF1Q9BQI6 LINC01230-201ENST00000625222 3017 ntBASIC16.83■□□□□ 0.29
SLF1Q9BQI6 ABR-228ENST00000574437 3196 ntTSL 5 BASIC16.83■□□□□ 0.29
SLF1Q9BQI6 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SLF1Q9BQI6 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.29
SLF1Q9BQI6 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLF1Q9BQI6 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 RNA5SP359-201ENST00000364838 113 ntBASIC16.83■□□□□ 0.28
SLF1Q9BQI6 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 AC069218.1-201ENST00000435269 762 ntBASIC16.83■□□□□ 0.28
SLF1Q9BQI6 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 ST13P19-201ENST00000442505 1124 ntBASIC16.83■□□□□ 0.28
SLF1Q9BQI6 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 MIR3677-201ENST00000578964 60 ntBASIC16.83■□□□□ 0.28
SLF1Q9BQI6 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.83■□□□□ 0.28
SLF1Q9BQI6 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLF1Q9BQI6 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 AC104581.4-201ENST00000623126 3052 ntBASIC16.82■□□□□ 0.28
SLF1Q9BQI6 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 AC027237.1-201ENST00000560942 655 ntBASIC16.82■□□□□ 0.28
SLF1Q9BQI6 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 AC051619.9-201ENST00000623237 597 ntBASIC16.82■□□□□ 0.28
SLF1Q9BQI6 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 OR2I1P-209ENST00000641730 5365 ntBASIC16.82■□□□□ 0.28
SLF1Q9BQI6 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.82■□□□□ 0.28
SLF1Q9BQI6 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SLF1Q9BQI6 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
SLF1Q9BQI6 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.81■□□□□ 0.28
SLF1Q9BQI6 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms