Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 AC023310.1-201ENST00000554836 735 ntBASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 AP005482.1-201ENST00000563722 1273 ntBASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 AL136301.1-201ENST00000615830 422 ntBASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 AL133338.1-201ENST00000565695 1517 ntBASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIMC1Q8NDZ2 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 RN7SL832P-201ENST00000607781 1756 ntBASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 AC152010.1-201ENST00000415779 2006 ntBASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 AC079316.1-201ENST00000548397 411 ntBASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 AL591122.2-201ENST00000624125 1853 ntBASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
SIMC1Q8NDZ2 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms