Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AC016397.2-201ENST00000624848 1985 ntBASIC21.93■■□□□ 1.1
CFAP43Q8NDM7 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CFAP43Q8NDM7 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CFAP43Q8NDM7 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CFAP43Q8NDM7 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC21.92■■□□□ 1.1
CFAP43Q8NDM7 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CFAP43Q8NDM7 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC21.92■■□□□ 1.1
CFAP43Q8NDM7 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CFAP43Q8NDM7 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CFAP43Q8NDM7 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CFAP43Q8NDM7 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC21.92■■□□□ 1.1
CFAP43Q8NDM7 VENTXP4-201ENST00000449029 958 ntBASIC21.92■■□□□ 1.1
CFAP43Q8NDM7 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC21.92■■□□□ 1.1
CFAP43Q8NDM7 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC21.92■■□□□ 1.1
CFAP43Q8NDM7 GPX3-202ENST00000517973 612 ntTSL 3 BASIC21.92■■□□□ 1.1
CFAP43Q8NDM7 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC21.92■■□□□ 1.1
CFAP43Q8NDM7 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CFAP43Q8NDM7 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC21.92■■□□□ 1.1
CFAP43Q8NDM7 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC21.92■■□□□ 1.1
CFAP43Q8NDM7 AC004466.2-201ENST00000614749 516 ntBASIC21.92■■□□□ 1.1
CFAP43Q8NDM7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC21.92■■□□□ 1.1
CFAP43Q8NDM7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CFAP43Q8NDM7 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC21.92■■□□□ 1.1
CFAP43Q8NDM7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
CFAP43Q8NDM7 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CFAP43Q8NDM7 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC21.92■■□□□ 1.1
CFAP43Q8NDM7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC21.92■■□□□ 1.1
CFAP43Q8NDM7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CFAP43Q8NDM7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CFAP43Q8NDM7 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CFAP43Q8NDM7 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
CFAP43Q8NDM7 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC21.92■■□□□ 1.1
CFAP43Q8NDM7 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
CFAP43Q8NDM7 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC21.92■■□□□ 1.1
CFAP43Q8NDM7 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CFAP43Q8NDM7 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CFAP43Q8NDM7 RPL14-203ENST00000416518 812 ntTSL 3 BASIC21.91■■□□□ 1.1
CFAP43Q8NDM7 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
CFAP43Q8NDM7 AC092903.1-201ENST00000466506 262 ntBASIC21.91■■□□□ 1.1
CFAP43Q8NDM7 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC21.91■■□□□ 1.1
CFAP43Q8NDM7 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC21.91■■□□□ 1.1
CFAP43Q8NDM7 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CFAP43Q8NDM7 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC21.91■■□□□ 1.1
CFAP43Q8NDM7 AL353622.2-201ENST00000605846 425 ntBASIC21.91■■□□□ 1.1
CFAP43Q8NDM7 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC21.91■■□□□ 1.1
CFAP43Q8NDM7 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC21.91■■□□□ 1.1
CFAP43Q8NDM7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CFAP43Q8NDM7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.91■■□□□ 1.1
CFAP43Q8NDM7 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CFAP43Q8NDM7 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
CFAP43Q8NDM7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC21.91■■□□□ 1.1
CFAP43Q8NDM7 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CFAP43Q8NDM7 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC21.91■■□□□ 1.1
CFAP43Q8NDM7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CFAP43Q8NDM7 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CFAP43Q8NDM7 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC21.91■■□□□ 1.1
CFAP43Q8NDM7 KRT18P62-201ENST00000446618 1287 ntBASIC21.91■■□□□ 1.1
CFAP43Q8NDM7 PRSS3P1-201ENST00000503996 742 ntBASIC21.91■■□□□ 1.1
CFAP43Q8NDM7 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC21.91■■□□□ 1.1
CFAP43Q8NDM7 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC21.91■■□□□ 1.1
CFAP43Q8NDM7 AC078814.4-201ENST00000546650 327 ntBASIC21.91■■□□□ 1.1
CFAP43Q8NDM7 AC120498.7-201ENST00000562876 330 ntBASIC21.91■■□□□ 1.1
CFAP43Q8NDM7 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC21.91■■□□□ 1.1
CFAP43Q8NDM7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CFAP43Q8NDM7 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC21.91■■□□□ 1.1
CFAP43Q8NDM7 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CFAP43Q8NDM7 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CFAP43Q8NDM7 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CFAP43Q8NDM7 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CFAP43Q8NDM7 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CFAP43Q8NDM7 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC21.9■■□□□ 1.1
CFAP43Q8NDM7 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC21.9■■□□□ 1.1
CFAP43Q8NDM7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CFAP43Q8NDM7 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC21.9■■□□□ 1.1
CFAP43Q8NDM7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CFAP43Q8NDM7 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CFAP43Q8NDM7 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CFAP43Q8NDM7 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC21.9■■□□□ 1.1
CFAP43Q8NDM7 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CFAP43Q8NDM7 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CFAP43Q8NDM7 OR7E115P-201ENST00000382617 1024 ntBASIC21.9■■□□□ 1.1
CFAP43Q8NDM7 AP000244.1-201ENST00000424582 201 ntBASIC21.9■■□□□ 1.1
CFAP43Q8NDM7 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC21.9■■□□□ 1.1
CFAP43Q8NDM7 GALP-202ENST00000440823 889 ntTSL 5 BASIC21.9■■□□□ 1.1
CFAP43Q8NDM7 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CFAP43Q8NDM7 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC21.9■■□□□ 1.1
CFAP43Q8NDM7 HNRNPA1P5-201ENST00000558213 966 ntBASIC21.9■■□□□ 1.1
CFAP43Q8NDM7 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CFAP43Q8NDM7 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CFAP43Q8NDM7 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC21.9■■□□□ 1.1
CFAP43Q8NDM7 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CFAP43Q8NDM7 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CFAP43Q8NDM7 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CFAP43Q8NDM7 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
CFAP43Q8NDM7 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC21.9■■□□□ 1.1
CFAP43Q8NDM7 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC21.9■■□□□ 1.1
CFAP43Q8NDM7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CFAP43Q8NDM7 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CFAP43Q8NDM7 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CFAP43Q8NDM7 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms