Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 IDS-203ENST00000428056 1213 ntTSL 2 BASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 PGAM1P12-201ENST00000505622 748 ntBASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 AC093826.1-201ENST00000508655 993 ntBASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 AC019109.1-201ENST00000401725 1874 ntBASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 KRT8P18-201ENST00000413425 1445 ntBASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC15.33■□□□□ 0.04
NPAS4Q8IUM7 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 ODCP-201ENST00000459650 1639 ntBASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 AC108734.2-201ENST00000420887 1069 ntBASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 AL135901.1-201ENST00000451812 333 ntBASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 RN7SL375P-201ENST00000492442 298 ntBASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 SLC25A15P3-201ENST00000505530 290 ntBASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 AL512310.5-201ENST00000551999 515 ntBASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 MIR4265-201ENST00000582152 99 ntBASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 AC010976.2-201ENST00000609697 852 ntBASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 MSANTD2P1-201ENST00000445341 1368 ntBASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 AC007952.5-201ENST00000572818 1486 ntBASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.32■□□□□ 0.04
NPAS4Q8IUM7 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS4Q8IUM7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS4Q8IUM7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.31■□□□□ 0.04
NPAS4Q8IUM7 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS4Q8IUM7 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.31■□□□□ 0.04
NPAS4Q8IUM7 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS4Q8IUM7 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
NPAS4Q8IUM7 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS4Q8IUM7 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.31■□□□□ 0.04
NPAS4Q8IUM7 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.31■□□□□ 0.04
NPAS4Q8IUM7 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS4Q8IUM7 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.31■□□□□ 0.04
NPAS4Q8IUM7 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS4Q8IUM7 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS4Q8IUM7 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS4Q8IUM7 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
NPAS4Q8IUM7 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS4Q8IUM7 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC15.31■□□□□ 0.04
NPAS4Q8IUM7 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC15.31■□□□□ 0.04
NPAS4Q8IUM7 MIR6746-201ENST00000620971 63 ntBASIC15.31■□□□□ 0.04
NPAS4Q8IUM7 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms