Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 AC018638.5-201ENST00000450885 754 ntBASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 KRT8P1-201ENST00000557533 1207 ntBASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 USB1-205ENST00000561743 1135 ntTSL 3 BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 AC009145.4-201ENST00000625119 1294 ntBASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 AC106881.1-201ENST00000605849 3329 ntBASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
OTOP1Q7RTM1 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
OTOP1Q7RTM1 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
OTOP1Q7RTM1 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
OTOP1Q7RTM1 AL390755.1-201ENST00000623716 2027 ntBASIC16.58■□□□□ 0.25
OTOP1Q7RTM1 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
OTOP1Q7RTM1 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
OTOP1Q7RTM1 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 NHP2P1-201ENST00000335274 462 ntBASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 CTSL-202ENST00000342020 933 ntTSL 2 BASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 CELP-201ENST00000411440 1249 ntTSL 5 BASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 RGS5-216ENST00000449680 788 ntTSL 3 BASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 RNA5SP406-201ENST00000516106 112 ntBASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 EMC4-208ENST00000559078 599 ntTSL 3 BASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 NAV1-210ENST00000593583 726 ntBASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 AC006372.4-201ENST00000624122 1543 ntBASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 LINC02228-204ENST00000642115 2962 ntBASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
OTOP1Q7RTM1 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
OTOP1Q7RTM1 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
OTOP1Q7RTM1 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.57■□□□□ 0.24
OTOP1Q7RTM1 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
OTOP1Q7RTM1 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC16.57■□□□□ 0.24
OTOP1Q7RTM1 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC16.57■□□□□ 0.24
OTOP1Q7RTM1 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
OTOP1Q7RTM1 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
OTOP1Q7RTM1 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
OTOP1Q7RTM1 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
OTOP1Q7RTM1 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.57■□□□□ 0.24
OTOP1Q7RTM1 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
OTOP1Q7RTM1 KHSRPP1-201ENST00000427983 1768 ntBASIC16.57■□□□□ 0.24
OTOP1Q7RTM1 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
OTOP1Q7RTM1 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
OTOP1Q7RTM1 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
OTOP1Q7RTM1 AC015688.4-201ENST00000580780 1647 ntBASIC16.57■□□□□ 0.24
OTOP1Q7RTM1 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
OTOP1Q7RTM1 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
OTOP1Q7RTM1 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
OTOP1Q7RTM1 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms