Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.9■□□□□ 0.62
USP31Q70CQ4 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
USP31Q70CQ4 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
USP31Q70CQ4 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
USP31Q70CQ4 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
USP31Q70CQ4 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP31Q70CQ4 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC18.89■□□□□ 0.61
USP31Q70CQ4 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP31Q70CQ4 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
USP31Q70CQ4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP31Q70CQ4 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP31Q70CQ4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
USP31Q70CQ4 DKKL1P1-201ENST00000400550 698 ntBASIC18.89■□□□□ 0.61
USP31Q70CQ4 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC18.89■□□□□ 0.61
USP31Q70CQ4 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP31Q70CQ4 AC063952.3-201ENST00000467756 308 ntBASIC18.89■□□□□ 0.61
USP31Q70CQ4 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP31Q70CQ4 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC18.89■□□□□ 0.61
USP31Q70CQ4 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC18.89■□□□□ 0.61
USP31Q70CQ4 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC18.89■□□□□ 0.61
USP31Q70CQ4 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
USP31Q70CQ4 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC18.89■□□□□ 0.61
USP31Q70CQ4 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC18.89■□□□□ 0.61
USP31Q70CQ4 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
USP31Q70CQ4 AP000769.1-203ENST00000637245 208 ntBASIC18.89■□□□□ 0.61
USP31Q70CQ4 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC18.89■□□□□ 0.61
USP31Q70CQ4 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP31Q70CQ4 TPO-203ENST00000346956 2923 ntTSL 5 BASIC18.89■□□□□ 0.61
USP31Q70CQ4 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP31Q70CQ4 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP31Q70CQ4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP31Q70CQ4 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP31Q70CQ4 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP31Q70CQ4 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
USP31Q70CQ4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP31Q70CQ4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP31Q70CQ4 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
USP31Q70CQ4 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP31Q70CQ4 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC18.88■□□□□ 0.61
USP31Q70CQ4 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
USP31Q70CQ4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP31Q70CQ4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP31Q70CQ4 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP31Q70CQ4 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP31Q70CQ4 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
USP31Q70CQ4 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
USP31Q70CQ4 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
USP31Q70CQ4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.88■□□□□ 0.61
USP31Q70CQ4 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP31Q70CQ4 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC18.88■□□□□ 0.61
USP31Q70CQ4 GEMIN8P4-201ENST00000380526 729 ntBASIC18.88■□□□□ 0.61
USP31Q70CQ4 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC18.88■□□□□ 0.61
USP31Q70CQ4 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC18.88■□□□□ 0.61
USP31Q70CQ4 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC18.88■□□□□ 0.61
USP31Q70CQ4 ALG1L7P-201ENST00000502317 768 ntBASIC18.88■□□□□ 0.61
USP31Q70CQ4 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC18.88■□□□□ 0.61
USP31Q70CQ4 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP31Q70CQ4 AC005777.1-201ENST00000588332 187 ntBASIC18.88■□□□□ 0.61
USP31Q70CQ4 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC18.88■□□□□ 0.61
USP31Q70CQ4 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC18.88■□□□□ 0.61
USP31Q70CQ4 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC18.88■□□□□ 0.61
USP31Q70CQ4 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC18.88■□□□□ 0.61
USP31Q70CQ4 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP31Q70CQ4 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP31Q70CQ4 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC18.88■□□□□ 0.61
USP31Q70CQ4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP31Q70CQ4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
USP31Q70CQ4 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP31Q70CQ4 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC18.88■□□□□ 0.61
USP31Q70CQ4 AC092115.1-201ENST00000566277 1402 ntBASIC18.87■□□□□ 0.61
USP31Q70CQ4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.87■□□□□ 0.61
USP31Q70CQ4 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
USP31Q70CQ4 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC18.87■□□□□ 0.61
USP31Q70CQ4 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC18.87■□□□□ 0.61
USP31Q70CQ4 AC097359.2-201ENST00000604992 2389 ntBASIC18.87■□□□□ 0.61
USP31Q70CQ4 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP31Q70CQ4 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC18.87■□□□□ 0.61
USP31Q70CQ4 USP39-207ENST00000450066 2086 ntTSL 2 BASIC18.87■□□□□ 0.61
USP31Q70CQ4 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP31Q70CQ4 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
USP31Q70CQ4 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP31Q70CQ4 AP000354.1-201ENST00000396982 456 ntBASIC18.87■□□□□ 0.61
USP31Q70CQ4 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC18.87■□□□□ 0.61
USP31Q70CQ4 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP31Q70CQ4 ASS1P2-201ENST00000439895 1223 ntBASIC18.87■□□□□ 0.61
USP31Q70CQ4 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC18.87■□□□□ 0.61
USP31Q70CQ4 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC18.87■□□□□ 0.61
USP31Q70CQ4 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP31Q70CQ4 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC18.87■□□□□ 0.61
USP31Q70CQ4 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC18.87■□□□□ 0.61
USP31Q70CQ4 GDNF-207ENST00000515058 764 ntTSL 5 BASIC18.87■□□□□ 0.61
USP31Q70CQ4 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC18.87■□□□□ 0.61
USP31Q70CQ4 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC18.87■□□□□ 0.61
USP31Q70CQ4 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC18.87■□□□□ 0.61
USP31Q70CQ4 AC073869.4-201ENST00000620841 800 ntBASIC18.87■□□□□ 0.61
USP31Q70CQ4 AC126755.5-201ENST00000622756 267 ntBASIC18.87■□□□□ 0.61
USP31Q70CQ4 AC026336.4-201ENST00000624565 1050 ntBASIC18.87■□□□□ 0.61
USP31Q70CQ4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP31Q70CQ4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
USP31Q70CQ4 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms