Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 AC100757.3-201ENST00000622361 1406 ntBASIC11.6□□□□□ -0.55
FAM78BQ5VT40 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 PTPRVP-205ENST00000641549 5067 ntBASIC11.6□□□□□ -0.55
FAM78BQ5VT40 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 AL805961.2-201ENST00000642139 4817 ntBASIC11.6□□□□□ -0.55
FAM78BQ5VT40 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 AL353779.1-201ENST00000434793 351 ntBASIC11.6□□□□□ -0.55
FAM78BQ5VT40 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 GAPDHP40-201ENST00000505218 1006 ntBASIC11.6□□□□□ -0.55
FAM78BQ5VT40 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 DUX4L27-201ENST00000554796 1261 ntBASIC11.6□□□□□ -0.55
FAM78BQ5VT40 AC044860.1-202ENST00000559481 777 ntBASIC11.6□□□□□ -0.55
FAM78BQ5VT40 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 MIR6074-201ENST00000612054 107 ntBASIC11.6□□□□□ -0.55
FAM78BQ5VT40 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 TP73-201ENST00000346387 4854 ntTSL 5 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC11.6□□□□□ -0.55
FAM78BQ5VT40 HSPA8P5-201ENST00000456928 2069 ntBASIC11.59□□□□□ -0.55
FAM78BQ5VT40 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms