Protein–RNA interactions for Protein: Q587J8

KHDC3L, KHDC3-like protein, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC3LQ587J8 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
KHDC3LQ587J8 AC012531.1-201ENST00000562848 2680 ntBASIC11.62□□□□□ -0.55
KHDC3LQ587J8 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 TP73-201ENST00000346387 4854 ntTSL 5 BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 SUN1-204ENST00000403868 978 ntTSL 2 BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 AL627223.1-201ENST00000416693 442 ntBASIC11.61□□□□□ -0.55
KHDC3LQ587J8 AL590627.1-203ENST00000421194 1026 ntBASIC11.61□□□□□ -0.55
KHDC3LQ587J8 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 AL355102.3-201ENST00000554299 1678 ntBASIC11.61□□□□□ -0.55
KHDC3LQ587J8 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 AL031719.1-201ENST00000623365 2587 ntBASIC11.61□□□□□ -0.55
KHDC3LQ587J8 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
KHDC3LQ587J8 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC11.6□□□□□ -0.55
KHDC3LQ587J8 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
KHDC3LQ587J8 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC11.6□□□□□ -0.55
KHDC3LQ587J8 AC010970.1-201ENST00000445125 1848 ntBASIC11.6□□□□□ -0.55
KHDC3LQ587J8 F2-205ENST00000530231 1849 ntTSL 5 BASIC11.6□□□□□ -0.55
KHDC3LQ587J8 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
KHDC3LQ587J8 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC11.6□□□□□ -0.55
KHDC3LQ587J8 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
KHDC3LQ587J8 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
KHDC3LQ587J8 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
KHDC3LQ587J8 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
KHDC3LQ587J8 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
KHDC3LQ587J8 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
KHDC3LQ587J8 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC11.6□□□□□ -0.55
KHDC3LQ587J8 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
KHDC3LQ587J8 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
KHDC3LQ587J8 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC11.6□□□□□ -0.55
KHDC3LQ587J8 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
KHDC3LQ587J8 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
KHDC3LQ587J8 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
KHDC3LQ587J8 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
KHDC3LQ587J8 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
KHDC3LQ587J8 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
KHDC3LQ587J8 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
KHDC3LQ587J8 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
KHDC3LQ587J8 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
KHDC3LQ587J8 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
KHDC3LQ587J8 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
KHDC3LQ587J8 SPDYE7P-202ENST00000420373 878 ntBASIC11.6□□□□□ -0.55
KHDC3LQ587J8 HTR5BP-201ENST00000430851 1154 ntBASIC11.6□□□□□ -0.55
KHDC3LQ587J8 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC11.6□□□□□ -0.55
KHDC3LQ587J8 SPDYE14P-201ENST00000442619 822 ntBASIC11.6□□□□□ -0.55
KHDC3LQ587J8 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC11.6□□□□□ -0.55
KHDC3LQ587J8 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms