Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 NQO2-204ENST00000380454 851 ntTSL 2 BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 BX088651.3-201ENST00000418155 352 ntBASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 RN7SL128P-201ENST00000467883 305 ntBASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 HNRNPA1P56-201ENST00000505767 954 ntBASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 MBP-230ENST00000528160 584 ntTSL 5 BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 AC145285.5-201ENST00000562217 361 ntBASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 CES1P2-201ENST00000566467 1242 ntBASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 AC079414.2-201ENST00000567157 1104 ntBASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 ANKRD26P1-203ENST00000569528 966 ntBASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 RN7SL440P-201ENST00000577855 343 ntBASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 OR3A1-202ENST00000615105 966 ntBASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 BRD7P5-201ENST00000299197 1822 ntBASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 CICP11-201ENST00000434745 2827 ntBASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 CDK4P1-201ENST00000454213 828 ntBASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 RN7SL578P-201ENST00000477781 283 ntBASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 AC025186.1-201ENST00000478174 870 ntBASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 AC011431.1-201ENST00000512971 230 ntBASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 AC087203.1-201ENST00000532111 1181 ntBASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 BMF-206ENST00000558774 671 ntTSL 3 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 AP005264.5-201ENST00000590066 467 ntBASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms