Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCDH1Q08174 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCDH1Q08174 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
PCDH1Q08174 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCDH1Q08174 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCDH1Q08174 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
PCDH1Q08174 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14□□□□□ -0.17
PCDH1Q08174 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PCDH1Q08174 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCDH1Q08174 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PCDH1Q08174 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCDH1Q08174 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14□□□□□ -0.17
PCDH1Q08174 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14□□□□□ -0.17
PCDH1Q08174 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PCDH1Q08174 AL008718.2-201ENST00000609206 1313 ntBASIC14□□□□□ -0.17
PCDH1Q08174 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
PCDH1Q08174 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14□□□□□ -0.17
PCDH1Q08174 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCDH1Q08174 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14□□□□□ -0.17
PCDH1Q08174 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCDH1Q08174 GK-202ENST00000378941 458 ntTSL 3 BASIC14□□□□□ -0.17
PCDH1Q08174 USP17L6P-201ENST00000382470 1197 ntBASIC14□□□□□ -0.17
PCDH1Q08174 AC099336.1-201ENST00000417053 1171 ntBASIC14□□□□□ -0.17
PCDH1Q08174 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14□□□□□ -0.17
PCDH1Q08174 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14□□□□□ -0.17
PCDH1Q08174 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PCDH1Q08174 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14□□□□□ -0.17
PCDH1Q08174 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14□□□□□ -0.17
PCDH1Q08174 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14□□□□□ -0.17
PCDH1Q08174 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCDH1Q08174 SNX29P1-201ENST00000548357 1007 ntBASIC14□□□□□ -0.17
PCDH1Q08174 HNRNPA1P48-202ENST00000565308 961 ntBASIC14□□□□□ -0.17
PCDH1Q08174 EEF1DP1-201ENST00000585891 896 ntBASIC14□□□□□ -0.17
PCDH1Q08174 AP000346.4-201ENST00000614827 381 ntBASIC14□□□□□ -0.17
PCDH1Q08174 MIR6775-201ENST00000617557 69 ntBASIC14□□□□□ -0.17
PCDH1Q08174 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14□□□□□ -0.17
PCDH1Q08174 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
PCDH1Q08174 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
PCDH1Q08174 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCDH1Q08174 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PCDH1Q08174 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PCDH1Q08174 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PCDH1Q08174 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14□□□□□ -0.17
PCDH1Q08174 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14□□□□□ -0.17
PCDH1Q08174 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PCDH1Q08174 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDH1Q08174 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.99□□□□□ -0.17
PCDH1Q08174 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCDH1Q08174 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
PCDH1Q08174 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDH1Q08174 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDH1Q08174 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PCDH1Q08174 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PCDH1Q08174 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.99□□□□□ -0.17
PCDH1Q08174 AC138969.2-201ENST00000532739 9932 ntBASIC13.99□□□□□ -0.17
PCDH1Q08174 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCDH1Q08174 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCDH1Q08174 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDH1Q08174 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDH1Q08174 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCDH1Q08174 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.99□□□□□ -0.17
PCDH1Q08174 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.99□□□□□ -0.17
PCDH1Q08174 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCDH1Q08174 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDH1Q08174 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCDH1Q08174 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCDH1Q08174 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PCDH1Q08174 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDH1Q08174 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDH1Q08174 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.99□□□□□ -0.17
PCDH1Q08174 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
PCDH1Q08174 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.99□□□□□ -0.17
PCDH1Q08174 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.99□□□□□ -0.17
PCDH1Q08174 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PCDH1Q08174 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PCDH1Q08174 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.99□□□□□ -0.17
PCDH1Q08174 AC119751.2-201ENST00000504529 210 ntBASIC13.99□□□□□ -0.17
PCDH1Q08174 AC003686.1-201ENST00000550956 1034 ntBASIC13.99□□□□□ -0.17
PCDH1Q08174 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC13.99□□□□□ -0.17
PCDH1Q08174 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.99□□□□□ -0.17
PCDH1Q08174 AC009884.2-201ENST00000603110 324 ntBASIC13.99□□□□□ -0.17
PCDH1Q08174 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDH1Q08174 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.99□□□□□ -0.17
PCDH1Q08174 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
PCDH1Q08174 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
PCDH1Q08174 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCDH1Q08174 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCDH1Q08174 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCDH1Q08174 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDH1Q08174 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCDH1Q08174 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDH1Q08174 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.99□□□□□ -0.17
PCDH1Q08174 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.99□□□□□ -0.17
PCDH1Q08174 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.99□□□□□ -0.17
PCDH1Q08174 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDH1Q08174 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDH1Q08174 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDH1Q08174 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.99□□□□□ -0.17
PCDH1Q08174 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.99□□□□□ -0.17
PCDH1Q08174 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms