Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL16A1Q07092 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
COL16A1Q07092 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL16A1Q07092 HRASLS2-201ENST00000255695 742 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
COL16A1Q07092 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COL16A1Q07092 PMF1-201ENST00000368273 884 ntTSL 2 BASIC18.64■□□□□ 0.57
COL16A1Q07092 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC18.64■□□□□ 0.57
COL16A1Q07092 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL16A1Q07092 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
COL16A1Q07092 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC18.64■□□□□ 0.57
COL16A1Q07092 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC18.64■□□□□ 0.57
COL16A1Q07092 Z92544.2-202ENST00000566927 407 ntTSL 3 BASIC18.64■□□□□ 0.57
COL16A1Q07092 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
COL16A1Q07092 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC18.64■□□□□ 0.57
COL16A1Q07092 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL16A1Q07092 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
COL16A1Q07092 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL16A1Q07092 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.64■□□□□ 0.57
COL16A1Q07092 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL16A1Q07092 AL354702.1-201ENST00000442006 1960 ntBASIC18.64■□□□□ 0.57
COL16A1Q07092 KRT8P42-201ENST00000405771 1399 ntBASIC18.64■□□□□ 0.57
COL16A1Q07092 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL16A1Q07092 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC18.64■□□□□ 0.57
COL16A1Q07092 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.64■□□□□ 0.57
COL16A1Q07092 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COL16A1Q07092 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
COL16A1Q07092 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
COL16A1Q07092 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL16A1Q07092 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.64■□□□□ 0.57
COL16A1Q07092 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COL16A1Q07092 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL16A1Q07092 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL16A1Q07092 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COL16A1Q07092 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.64■□□□□ 0.57
COL16A1Q07092 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL16A1Q07092 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL16A1Q07092 ALMS1P1-201ENST00000428767 921 ntBASIC18.63■□□□□ 0.57
COL16A1Q07092 RN7SL22P-201ENST00000471800 269 ntBASIC18.63■□□□□ 0.57
COL16A1Q07092 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC18.63■□□□□ 0.57
COL16A1Q07092 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC18.63■□□□□ 0.57
COL16A1Q07092 SNRPN-208ENST00000577565 1298 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
COL16A1Q07092 AC016590.1-201ENST00000588763 420 ntTSL 2 BASIC18.63■□□□□ 0.57
COL16A1Q07092 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL16A1Q07092 AC069061.4-201ENST00000581294 1347 ntBASIC18.63■□□□□ 0.57
COL16A1Q07092 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL16A1Q07092 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC18.63■□□□□ 0.57
COL16A1Q07092 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
COL16A1Q07092 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL16A1Q07092 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
COL16A1Q07092 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL16A1Q07092 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL16A1Q07092 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL16A1Q07092 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL16A1Q07092 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
COL16A1Q07092 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL16A1Q07092 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL16A1Q07092 RPS6-201ENST00000315377 863 ntTSL 3 BASIC18.63■□□□□ 0.57
COL16A1Q07092 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL16A1Q07092 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL16A1Q07092 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC18.63■□□□□ 0.57
COL16A1Q07092 PRDX3P2-201ENST00000447051 611 ntBASIC18.63■□□□□ 0.57
COL16A1Q07092 KRT18P15-201ENST00000458108 1291 ntBASIC18.63■□□□□ 0.57
COL16A1Q07092 SNORA47-201ENST00000458862 138 ntBASIC18.63■□□□□ 0.57
COL16A1Q07092 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC18.63■□□□□ 0.57
COL16A1Q07092 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC18.63■□□□□ 0.57
COL16A1Q07092 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC18.63■□□□□ 0.57
COL16A1Q07092 AC022966.2-201ENST00000587434 367 ntBASIC18.63■□□□□ 0.57
COL16A1Q07092 AL356740.1-201ENST00000602192 1297 ntBASIC18.63■□□□□ 0.57
COL16A1Q07092 AC026271.1-201ENST00000447794 1348 ntBASIC18.63■□□□□ 0.57
COL16A1Q07092 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL16A1Q07092 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL16A1Q07092 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
COL16A1Q07092 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL16A1Q07092 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
COL16A1Q07092 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.62■□□□□ 0.57
COL16A1Q07092 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
COL16A1Q07092 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL16A1Q07092 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
COL16A1Q07092 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
COL16A1Q07092 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC18.62■□□□□ 0.57
COL16A1Q07092 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
COL16A1Q07092 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
COL16A1Q07092 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL16A1Q07092 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL16A1Q07092 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL16A1Q07092 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL16A1Q07092 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
COL16A1Q07092 DNM1P48-201ENST00000419538 439 ntBASIC18.62■□□□□ 0.57
COL16A1Q07092 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC18.62■□□□□ 0.57
COL16A1Q07092 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL16A1Q07092 STEAP2-AS1-202ENST00000478318 627 ntTSL 3 BASIC18.62■□□□□ 0.57
COL16A1Q07092 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC18.62■□□□□ 0.57
COL16A1Q07092 FTH1-205ENST00000529631 507 ntTSL 4 BASIC18.62■□□□□ 0.57
COL16A1Q07092 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC18.62■□□□□ 0.57
COL16A1Q07092 PMM2-216ENST00000569958 698 ntTSL 2 BASIC18.62■□□□□ 0.57
COL16A1Q07092 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC18.62■□□□□ 0.57
COL16A1Q07092 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC18.62■□□□□ 0.57
COL16A1Q07092 MIR6074-201ENST00000612054 107 ntBASIC18.62■□□□□ 0.57
COL16A1Q07092 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
COL16A1Q07092 AC137723.2-201ENST00000623540 398 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms