Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.95■□□□□ 0.3
IRX3P78415 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC16.95■□□□□ 0.3
IRX3P78415 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
IRX3P78415 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IRX3P78415 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.95■□□□□ 0.3
IRX3P78415 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
IRX3P78415 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.95■□□□□ 0.3
IRX3P78415 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.95■□□□□ 0.3
IRX3P78415 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IRX3P78415 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
IRX3P78415 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IRX3P78415 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IRX3P78415 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.95■□□□□ 0.3
IRX3P78415 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.94■□□□□ 0.3
IRX3P78415 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IRX3P78415 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IRX3P78415 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
IRX3P78415 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IRX3P78415 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.94■□□□□ 0.3
IRX3P78415 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC16.94■□□□□ 0.3
IRX3P78415 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
IRX3P78415 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
IRX3P78415 AL136172.1-201ENST00000598590 1394 ntBASIC16.94■□□□□ 0.3
IRX3P78415 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
IRX3P78415 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
IRX3P78415 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
IRX3P78415 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.94■□□□□ 0.3
IRX3P78415 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC16.94■□□□□ 0.3
IRX3P78415 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
IRX3P78415 BANF1P3-201ENST00000412556 261 ntBASIC16.94■□□□□ 0.3
IRX3P78415 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC16.94■□□□□ 0.3
IRX3P78415 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.94■□□□□ 0.3
IRX3P78415 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.94■□□□□ 0.3
IRX3P78415 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
IRX3P78415 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.94■□□□□ 0.3
IRX3P78415 NAGK-204ENST00000443872 878 ntTSL 3 BASIC16.94■□□□□ 0.3
IRX3P78415 RPSAP15-201ENST00000448168 861 ntBASIC16.94■□□□□ 0.3
IRX3P78415 DUTP3-201ENST00000450025 415 ntBASIC16.94■□□□□ 0.3
IRX3P78415 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
IRX3P78415 CHCHD2P9-201ENST00000461726 456 ntBASIC16.94■□□□□ 0.3
IRX3P78415 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC16.94■□□□□ 0.3
IRX3P78415 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC16.94■□□□□ 0.3
IRX3P78415 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
IRX3P78415 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC16.94■□□□□ 0.3
IRX3P78415 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.94■□□□□ 0.3
IRX3P78415 DNM1P30-201ENST00000563586 452 ntBASIC16.94■□□□□ 0.3
IRX3P78415 AC007326.1-201ENST00000604539 458 ntBASIC16.94■□□□□ 0.3
IRX3P78415 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.94■□□□□ 0.3
IRX3P78415 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IRX3P78415 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IRX3P78415 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.94■□□□□ 0.3
IRX3P78415 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
IRX3P78415 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
IRX3P78415 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IRX3P78415 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
IRX3P78415 AC007326.2-201ENST00000624224 7579 ntBASIC16.94■□□□□ 0.3
IRX3P78415 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
IRX3P78415 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IRX3P78415 MRPL37P1-201ENST00000592451 1337 ntBASIC16.94■□□□□ 0.3
IRX3P78415 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IRX3P78415 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
IRX3P78415 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IRX3P78415 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IRX3P78415 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IRX3P78415 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
IRX3P78415 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IRX3P78415 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IRX3P78415 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
IRX3P78415 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.93■□□□□ 0.3
IRX3P78415 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC16.93■□□□□ 0.3
IRX3P78415 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC16.93■□□□□ 0.3
IRX3P78415 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IRX3P78415 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
IRX3P78415 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC16.93■□□□□ 0.3
IRX3P78415 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
IRX3P78415 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
IRX3P78415 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.93■□□□□ 0.3
IRX3P78415 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
IRX3P78415 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
IRX3P78415 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IRX3P78415 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
IRX3P78415 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IRX3P78415 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IRX3P78415 MIR557-201ENST00000385239 98 ntBASIC16.93■□□□□ 0.3
IRX3P78415 AL807761.2-201ENST00000422849 729 ntBASIC16.93■□□□□ 0.3
IRX3P78415 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
IRX3P78415 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.93■□□□□ 0.3
IRX3P78415 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
IRX3P78415 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC16.93■□□□□ 0.3
IRX3P78415 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.93■□□□□ 0.3
IRX3P78415 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IRX3P78415 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.93■□□□□ 0.3
IRX3P78415 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IRX3P78415 AC136621.1-201ENST00000624017 2304 ntBASIC16.93■□□□□ 0.3
IRX3P78415 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.93■□□□□ 0.3
IRX3P78415 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
IRX3P78415 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
IRX3P78415 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IRX3P78415 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
IRX3P78415 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms