Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN8P56748 AC087386.2-201ENST00000623212 4637 ntBASIC13.79□□□□□ -0.2
CLDN8P56748 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN8P56748 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CLDN8P56748 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN8P56748 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CLDN8P56748 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN8P56748 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
CLDN8P56748 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CLDN8P56748 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN8P56748 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.79□□□□□ -0.2
CLDN8P56748 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN8P56748 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN8P56748 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CLDN8P56748 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN8P56748 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN8P56748 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CLDN8P56748 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.78□□□□□ -0.2
CLDN8P56748 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN8P56748 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN8P56748 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.78□□□□□ -0.2
CLDN8P56748 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN8P56748 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN8P56748 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CLDN8P56748 AC006001.1-201ENST00000325130 474 ntBASIC13.78□□□□□ -0.2
CLDN8P56748 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN8P56748 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
CLDN8P56748 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDN8P56748 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.78□□□□□ -0.2
CLDN8P56748 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.78□□□□□ -0.2
CLDN8P56748 AL355994.2-201ENST00000447882 704 ntBASIC13.78□□□□□ -0.2
CLDN8P56748 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
CLDN8P56748 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.78□□□□□ -0.2
CLDN8P56748 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.78□□□□□ -0.2
CLDN8P56748 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.78□□□□□ -0.2
CLDN8P56748 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.78□□□□□ -0.2
CLDN8P56748 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.78□□□□□ -0.2
CLDN8P56748 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN8P56748 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CLDN8P56748 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CLDN8P56748 BTNL10-201ENST00000595971 695 ntBASIC13.78□□□□□ -0.2
CLDN8P56748 AC008735.3-201ENST00000596646 500 ntBASIC13.78□□□□□ -0.2
CLDN8P56748 AL136301.1-201ENST00000615830 422 ntBASIC13.78□□□□□ -0.2
CLDN8P56748 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CLDN8P56748 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN8P56748 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDN8P56748 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN8P56748 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.78□□□□□ -0.2
CLDN8P56748 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDN8P56748 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CLDN8P56748 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN8P56748 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN8P56748 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CLDN8P56748 TMBIM7P-202ENST00000641474 1516 ntBASIC13.78□□□□□ -0.2
CLDN8P56748 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN8P56748 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CLDN8P56748 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN8P56748 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN8P56748 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN8P56748 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN8P56748 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.78□□□□□ -0.2
CLDN8P56748 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDN8P56748 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN8P56748 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDN8P56748 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDN8P56748 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CLDN8P56748 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.2
CLDN8P56748 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CLDN8P56748 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.77□□□□□ -0.2
CLDN8P56748 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CLDN8P56748 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CLDN8P56748 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CLDN8P56748 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CLDN8P56748 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN8P56748 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN8P56748 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN8P56748 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN8P56748 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN8P56748 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN8P56748 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN8P56748 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN8P56748 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CLDN8P56748 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN8P56748 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN8P56748 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN8P56748 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.77□□□□□ -0.21
CLDN8P56748 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CLDN8P56748 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.77□□□□□ -0.21
CLDN8P56748 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.77□□□□□ -0.21
CLDN8P56748 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.77□□□□□ -0.21
CLDN8P56748 AC007551.1-201ENST00000457394 519 ntBASIC13.77□□□□□ -0.21
CLDN8P56748 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
CLDN8P56748 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.77□□□□□ -0.21
CLDN8P56748 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.77□□□□□ -0.21
CLDN8P56748 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.77□□□□□ -0.21
CLDN8P56748 KRT8P4-201ENST00000509735 1454 ntBASIC13.77□□□□□ -0.21
CLDN8P56748 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN8P56748 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.77□□□□□ -0.21
CLDN8P56748 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
CLDN8P56748 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms