Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
HMGA2P52926 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HMGA2P52926 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.21□□□□□ -0.29
HMGA2P52926 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HMGA2P52926 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HMGA2P52926 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.21□□□□□ -0.29
HMGA2P52926 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HMGA2P52926 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
HMGA2P52926 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
HMGA2P52926 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
HMGA2P52926 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
HMGA2P52926 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
HMGA2P52926 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
HMGA2P52926 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.21□□□□□ -0.29
HMGA2P52926 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.21□□□□□ -0.29
HMGA2P52926 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.21□□□□□ -0.29
HMGA2P52926 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.21□□□□□ -0.29
HMGA2P52926 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HMGA2P52926 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.21□□□□□ -0.29
HMGA2P52926 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HMGA2P52926 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.21□□□□□ -0.29
HMGA2P52926 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.21□□□□□ -0.29
HMGA2P52926 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.21□□□□□ -0.29
HMGA2P52926 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.21□□□□□ -0.29
HMGA2P52926 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.21□□□□□ -0.29
HMGA2P52926 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
HMGA2P52926 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.21□□□□□ -0.29
HMGA2P52926 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.21□□□□□ -0.29
HMGA2P52926 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.21□□□□□ -0.29
HMGA2P52926 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.21□□□□□ -0.29
HMGA2P52926 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.21□□□□□ -0.29
HMGA2P52926 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
HMGA2P52926 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HMGA2P52926 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.21□□□□□ -0.29
HMGA2P52926 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HMGA2P52926 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.21□□□□□ -0.29
HMGA2P52926 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
HMGA2P52926 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HMGA2P52926 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC13.21□□□□□ -0.29
HMGA2P52926 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
HMGA2P52926 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
HMGA2P52926 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.21□□□□□ -0.3
HMGA2P52926 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
HMGA2P52926 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
HMGA2P52926 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
HMGA2P52926 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HMGA2P52926 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
HMGA2P52926 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
HMGA2P52926 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HMGA2P52926 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HMGA2P52926 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HMGA2P52926 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.21□□□□□ -0.3
HMGA2P52926 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGA2P52926 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGA2P52926 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
HMGA2P52926 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGA2P52926 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGA2P52926 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGA2P52926 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
HMGA2P52926 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
HMGA2P52926 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
HMGA2P52926 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.2□□□□□ -0.3
HMGA2P52926 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.2□□□□□ -0.3
HMGA2P52926 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HMGA2P52926 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HMGA2P52926 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGA2P52926 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGA2P52926 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.2□□□□□ -0.3
HMGA2P52926 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGA2P52926 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGA2P52926 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGA2P52926 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGA2P52926 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGA2P52926 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.2□□□□□ -0.3
HMGA2P52926 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HMGA2P52926 AC010141.1-201ENST00000411585 623 ntBASIC13.2□□□□□ -0.3
HMGA2P52926 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.2□□□□□ -0.3
HMGA2P52926 CD8B2-202ENST00000417670 633 ntBASIC13.2□□□□□ -0.3
HMGA2P52926 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.2□□□□□ -0.3
HMGA2P52926 ST13P19-201ENST00000442505 1124 ntBASIC13.2□□□□□ -0.3
HMGA2P52926 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.2□□□□□ -0.3
HMGA2P52926 INGX-202ENST00000489074 768 ntBASIC13.2□□□□□ -0.3
HMGA2P52926 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.2□□□□□ -0.3
HMGA2P52926 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.2□□□□□ -0.3
HMGA2P52926 AC025279.2-201ENST00000569730 653 ntBASIC13.2□□□□□ -0.3
HMGA2P52926 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HMGA2P52926 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.2□□□□□ -0.3
HMGA2P52926 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
HMGA2P52926 RPSAP52-203ENST00000622976 1023 ntBASIC13.2□□□□□ -0.3
HMGA2P52926 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.2□□□□□ -0.3
HMGA2P52926 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.2□□□□□ -0.3
HMGA2P52926 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
HMGA2P52926 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.2□□□□□ -0.3
HMGA2P52926 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HMGA2P52926 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGA2P52926 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGA2P52926 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGA2P52926 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGA2P52926 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGA2P52926 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms