Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LHX2P50458 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC12.88□□□□□ -0.35
LHX2P50458 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LHX2P50458 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.88□□□□□ -0.35
LHX2P50458 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.88□□□□□ -0.35
LHX2P50458 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC12.88□□□□□ -0.35
LHX2P50458 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC12.88□□□□□ -0.35
LHX2P50458 IGLV3-15-201ENST00000518356 244 ntBASIC12.88□□□□□ -0.35
LHX2P50458 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
LHX2P50458 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
LHX2P50458 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC12.88□□□□□ -0.35
LHX2P50458 KRT8P1-201ENST00000557533 1207 ntBASIC12.88□□□□□ -0.35
LHX2P50458 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.88□□□□□ -0.35
LHX2P50458 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC12.88□□□□□ -0.35
LHX2P50458 MIR3677-201ENST00000578964 60 ntBASIC12.88□□□□□ -0.35
LHX2P50458 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC12.88□□□□□ -0.35
LHX2P50458 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LHX2P50458 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.88□□□□□ -0.35
LHX2P50458 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LHX2P50458 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LHX2P50458 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LHX2P50458 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
LHX2P50458 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
LHX2P50458 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LHX2P50458 AC104581.4-201ENST00000623126 3052 ntBASIC12.88□□□□□ -0.35
LHX2P50458 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.88□□□□□ -0.35
LHX2P50458 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
LHX2P50458 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
LHX2P50458 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
LHX2P50458 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
LHX2P50458 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
LHX2P50458 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LHX2P50458 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.88□□□□□ -0.35
LHX2P50458 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.88□□□□□ -0.35
LHX2P50458 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LHX2P50458 BX640514.1-201ENST00000583223 1918 ntBASIC12.88□□□□□ -0.35
LHX2P50458 BRD7P5-201ENST00000299197 1822 ntBASIC12.88□□□□□ -0.35
LHX2P50458 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.88□□□□□ -0.35
LHX2P50458 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LHX2P50458 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LHX2P50458 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.88□□□□□ -0.35
LHX2P50458 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LHX2P50458 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.88□□□□□ -0.35
LHX2P50458 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
LHX2P50458 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LHX2P50458 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LHX2P50458 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LHX2P50458 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LHX2P50458 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
LHX2P50458 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
LHX2P50458 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LHX2P50458 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
LHX2P50458 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LHX2P50458 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LHX2P50458 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LHX2P50458 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LHX2P50458 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
LHX2P50458 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
LHX2P50458 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
LHX2P50458 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LHX2P50458 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.87□□□□□ -0.35
LHX2P50458 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LHX2P50458 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LHX2P50458 CAP2P1-201ENST00000557743 1390 ntBASIC12.87□□□□□ -0.35
LHX2P50458 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LHX2P50458 KRT17P5-201ENST00000332088 839 ntBASIC12.87□□□□□ -0.35
LHX2P50458 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC12.87□□□□□ -0.35
LHX2P50458 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC12.87□□□□□ -0.35
LHX2P50458 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LHX2P50458 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LHX2P50458 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC12.87□□□□□ -0.35
LHX2P50458 RPL8P2-201ENST00000430538 502 ntBASIC12.87□□□□□ -0.35
LHX2P50458 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LHX2P50458 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC12.87□□□□□ -0.35
LHX2P50458 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC12.87□□□□□ -0.35
LHX2P50458 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.87□□□□□ -0.35
LHX2P50458 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LHX2P50458 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.87□□□□□ -0.35
LHX2P50458 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC12.87□□□□□ -0.35
LHX2P50458 AC079328.1-201ENST00000560358 952 ntBASIC12.87□□□□□ -0.35
LHX2P50458 SKA2-205ENST00000580541 689 ntTSL 3 BASIC12.87□□□□□ -0.35
LHX2P50458 HCG18-245ENST00000602550 559 ntTSL 4 BASIC12.87□□□□□ -0.35
LHX2P50458 AC007718.1-201ENST00000621078 280 ntBASIC12.87□□□□□ -0.35
LHX2P50458 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.87□□□□□ -0.35
LHX2P50458 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.87□□□□□ -0.35
LHX2P50458 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LHX2P50458 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LHX2P50458 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LHX2P50458 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
LHX2P50458 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
LHX2P50458 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LHX2P50458 HSPA8P5-201ENST00000456928 2069 ntBASIC12.87□□□□□ -0.35
LHX2P50458 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LHX2P50458 KRT8P31-201ENST00000504812 1408 ntBASIC12.87□□□□□ -0.35
LHX2P50458 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LHX2P50458 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.87□□□□□ -0.35
LHX2P50458 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
LHX2P50458 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LHX2P50458 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.86□□□□□ -0.35
LHX2P50458 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms