Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.12■□□□□ 0.01
MMP13P45452 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MMP13P45452 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MMP13P45452 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MMP13P45452 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MMP13P45452 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MMP13P45452 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MMP13P45452 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
MMP13P45452 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
MMP13P45452 AC019294.4-201ENST00000561777 2905 ntBASIC15.12■□□□□ 0.01
MMP13P45452 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MMP13P45452 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
MMP13P45452 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
MMP13P45452 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
MMP13P45452 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
MMP13P45452 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
MMP13P45452 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MMP13P45452 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
MMP13P45452 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MMP13P45452 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MMP13P45452 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
MMP13P45452 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC15.11■□□□□ 0.01
MMP13P45452 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MMP13P45452 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.11■□□□□ 0.01
MMP13P45452 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
MMP13P45452 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MMP13P45452 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC15.11■□□□□ 0.01
MMP13P45452 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.11■□□□□ 0.01
MMP13P45452 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC15.11■□□□□ 0.01
MMP13P45452 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
MMP13P45452 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
MMP13P45452 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MMP13P45452 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
MMP13P45452 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
MMP13P45452 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
MMP13P45452 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MMP13P45452 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.11■□□□□ 0.01
MMP13P45452 AL136309.1-201ENST00000403917 691 ntBASIC15.11■□□□□ 0.01
MMP13P45452 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
MMP13P45452 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.11■□□□□ 0.01
MMP13P45452 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.11■□□□□ 0.01
MMP13P45452 CNN2P10-201ENST00000443067 918 ntBASIC15.11■□□□□ 0.01
MMP13P45452 KRT223P-202ENST00000449164 1292 ntBASIC15.11■□□□□ 0.01
MMP13P45452 ALG3P1-201ENST00000508806 1114 ntBASIC15.11■□□□□ 0.01
MMP13P45452 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.11■□□□□ 0.01
MMP13P45452 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.11■□□□□ 0.01
MMP13P45452 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
MMP13P45452 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.11■□□□□ 0.01
MMP13P45452 PPY2P-201ENST00000582808 702 ntBASIC15.11■□□□□ 0.01
MMP13P45452 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MMP13P45452 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MMP13P45452 ZACNP1-201ENST00000612259 710 ntBASIC15.11■□□□□ 0.01
MMP13P45452 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
MMP13P45452 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.11■□□□□ 0.01
MMP13P45452 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.11■□□□□ 0.01
MMP13P45452 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MMP13P45452 MYADML-201ENST00000474610 2147 ntBASIC15.11■□□□□ 0.01
MMP13P45452 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.11■□□□□ 0.01
MMP13P45452 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.11■□□□□ 0.01
MMP13P45452 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MMP13P45452 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MMP13P45452 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MMP13P45452 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
MMP13P45452 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC15.11■□□□□ 0.01
MMP13P45452 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MMP13P45452 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
MMP13P45452 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
MMP13P45452 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
MMP13P45452 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
MMP13P45452 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MMP13P45452 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MMP13P45452 AC090643.2-201ENST00000623442 2029 ntBASIC15.1■□□□□ 0.01
MMP13P45452 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.1■□□□□ 0.01
MMP13P45452 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
MMP13P45452 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MMP13P45452 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.1■□□□□ 0.01
MMP13P45452 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MMP13P45452 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.1■□□□□ 0.01
MMP13P45452 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
MMP13P45452 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.1■□□□□ 0.01
MMP13P45452 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MMP13P45452 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
MMP13P45452 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MMP13P45452 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
MMP13P45452 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.1■□□□□ 0.01
MMP13P45452 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MMP13P45452 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
MMP13P45452 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC15.1■□□□□ 0.01
MMP13P45452 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MMP13P45452 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MMP13P45452 MIR658-201ENST00000385210 100 ntBASIC15.1■□□□□ 0.01
MMP13P45452 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
MMP13P45452 AC099336.1-201ENST00000417053 1171 ntBASIC15.1■□□□□ 0.01
MMP13P45452 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.1■□□□□ 0.01
MMP13P45452 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.1■□□□□ 0.01
MMP13P45452 HLA-V-201ENST00000429037 534 ntBASIC15.1■□□□□ 0.01
MMP13P45452 CSF2RBP1-201ENST00000447905 391 ntBASIC15.1■□□□□ 0.01
MMP13P45452 HOMER2P2-201ENST00000451621 847 ntBASIC15.1■□□□□ 0.01
MMP13P45452 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
MMP13P45452 AC119751.2-201ENST00000504529 210 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms