Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PDE6BP35913 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6BP35913 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6BP35913 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6BP35913 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6BP35913 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6BP35913 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6BP35913 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PDE6BP35913 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6BP35913 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6BP35913 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6BP35913 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6BP35913 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PDE6BP35913 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6BP35913 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6BP35913 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC17.62■□□□□ 0.41
PDE6BP35913 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC17.62■□□□□ 0.41
PDE6BP35913 PSAT1P2-201ENST00000426107 972 ntBASIC17.62■□□□□ 0.41
PDE6BP35913 AL929302.1-201ENST00000426556 871 ntBASIC17.62■□□□□ 0.41
PDE6BP35913 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC17.62■□□□□ 0.41
PDE6BP35913 RPL3P5-201ENST00000441645 1232 ntBASIC17.62■□□□□ 0.41
PDE6BP35913 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC17.62■□□□□ 0.41
PDE6BP35913 EEF1GP8-201ENST00000506566 1154 ntBASIC17.62■□□□□ 0.41
PDE6BP35913 CASP3-205ENST00000517513 964 ntTSL 5 BASIC17.62■□□□□ 0.41
PDE6BP35913 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
PDE6BP35913 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6BP35913 AL132994.1-201ENST00000554098 400 ntBASIC17.62■□□□□ 0.41
PDE6BP35913 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PDE6BP35913 CMC2-204ENST00000562713 573 ntTSL 3 BASIC17.62■□□□□ 0.41
PDE6BP35913 CMC2-209ENST00000565108 399 ntTSL 2 BASIC17.62■□□□□ 0.41
PDE6BP35913 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6BP35913 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC17.62■□□□□ 0.41
PDE6BP35913 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC17.62■□□□□ 0.41
PDE6BP35913 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6BP35913 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6BP35913 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6BP35913 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.62■□□□□ 0.41
PDE6BP35913 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6BP35913 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6BP35913 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC17.62■□□□□ 0.41
PDE6BP35913 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6BP35913 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.62■□□□□ 0.41
PDE6BP35913 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PDE6BP35913 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6BP35913 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6BP35913 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.62■□□□□ 0.41
PDE6BP35913 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PDE6BP35913 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.61■□□□□ 0.41
PDE6BP35913 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6BP35913 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6BP35913 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PDE6BP35913 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6BP35913 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6BP35913 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6BP35913 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.61■□□□□ 0.41
PDE6BP35913 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PDE6BP35913 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PDE6BP35913 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6BP35913 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6BP35913 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC17.61■□□□□ 0.41
PDE6BP35913 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6BP35913 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC17.61■□□□□ 0.41
PDE6BP35913 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6BP35913 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6BP35913 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6BP35913 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PDE6BP35913 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC17.61■□□□□ 0.41
PDE6BP35913 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC17.61■□□□□ 0.41
PDE6BP35913 SLC25A15P3-201ENST00000505530 290 ntBASIC17.61■□□□□ 0.41
PDE6BP35913 AC100858.1-201ENST00000514059 1228 ntBASIC17.61■□□□□ 0.41
PDE6BP35913 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC17.61■□□□□ 0.41
PDE6BP35913 BATF-202ENST00000555504 361 ntTSL 2 BASIC17.61■□□□□ 0.41
PDE6BP35913 DLK1-205ENST00000556051 469 ntTSL 2 BASIC17.61■□□□□ 0.41
PDE6BP35913 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6BP35913 AC104506.1-201ENST00000609247 429 ntBASIC17.61■□□□□ 0.41
PDE6BP35913 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC17.61■□□□□ 0.41
PDE6BP35913 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC17.61■□□□□ 0.41
PDE6BP35913 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6BP35913 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC17.61■□□□□ 0.41
PDE6BP35913 LINC00115-201ENST00000473798 1317 ntBASIC17.61■□□□□ 0.41
PDE6BP35913 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6BP35913 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PDE6BP35913 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6BP35913 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6BP35913 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC17.61■□□□□ 0.41
PDE6BP35913 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6BP35913 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.61■□□□□ 0.41
PDE6BP35913 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6BP35913 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PDE6BP35913 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6BP35913 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6BP35913 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PDE6BP35913 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.6■□□□□ 0.41
PDE6BP35913 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC17.6■□□□□ 0.41
PDE6BP35913 AC018442.1-201ENST00000421439 2061 ntBASIC17.6■□□□□ 0.41
PDE6BP35913 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6BP35913 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6BP35913 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6BP35913 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6BP35913 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms